Pre_GI: BLASTN Hits

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Query: NC_010001:1488000 Clostridium phytofermentans ISDg, complete genome

Start: 1488000, End: 1511191, Length: 23192

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009922:86826286826289020421943Alkaliphilus oremlandii OhILAs, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014019:35433893543389356611222724Bacillus megaterium QM B1551 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_018664:3009166*3009166304846639301Clostridium acidurici 9a chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010674:18229631822963184273319771Clostridium botulinum B str. Eklund 17B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010723:19671061967106199111924014Clostridium botulinum E3 str. Alaska E43, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008261:10485151048515107289224378Clostridium perfringens ATCC 13124, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_003366:10917661091766111615524390Clostridium perfringens str. 13, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010001:45860004586000460866422665Clostridium phytofermentans ISDg, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010001:17450891745089177589430806Clostridium phytofermentans ISDg, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010001:312500*31250033209919600Clostridium phytofermentans ISDg, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010001:90250690250692609923594Clostridium phytofermentans ISDg, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014376:15866491586649160872922081Clostridium saccharolyticum WM1 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014614:284005*28400531809934095Clostridium sticklandii, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004557:2289135*2289135231328724153Clostridium tetani E88, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015975:78931278931281162622315Lactobacillus ruminis ATCC 27782 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014538:985339985339100713721799Thermoanaerobacter sp. X513 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg