Pre_GI: BLASTN Hits

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Query: NC_009953:3385428 Salinispora arenicola CNS-205 chromosome, complete genome

Start: 3385428, End: 3406784, Length: 21357

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013131:621366*62136664479723432Catenulispora acidiphila DSM 44928, complete genome1e-0560BLASTN svgBLASTP svg
NC_002696:2829002*2829002285565626655Caulobacter crescentus CB15, complete genome1e-0560BLASTN svgBLASTP svg
NC_014100:1144463*1144463117100626544Caulobacter segnis ATCC 21756 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015514:18177318177320534923577Cellulomonas fimi ATCC 484 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
NC_015671:25580825580830092445117Cellvibrio gilvus ATCC 13127 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014830:335380*33538037339338014Intrasporangium calvum DSM 43043 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012803:361127*36112738262921503Micrococcus luteus NCTC 2665, complete genome1e-0560BLASTN svgBLASTP svg
NC_014391:6848475*6848475686836219888Micromonospora aurantiaca ATCC 27029 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014391:67105006710500673732426825Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_014391:4617688*4617688463728919602Micromonospora aurantiaca ATCC 27029 chromosome, complete genome7e-19103BLASTN svgBLASTP svg
NC_014815:6779538*6779538680255323016Micromonospora sp. L5 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_010397:23597623597625991123936Mycobacterium abscessus chromosome Chromosome, complete sequence1e-0560BLASTN svgBLASTP svg
NC_015312:1191633*1191633121600524373Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_013959:839928399210878124790Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003155:22110872211087223044019354Streptomyces avermitilis MA-4680, complete genome1e-0560BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-26129BLASTN svgBLASTP svg