Pre_GI: BLASTN Hits

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Query: NC_009953:3316782 Salinispora arenicola CNS-205 chromosome, complete genome

Start: 3316782, End: 3338018, Length: 21237

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013131:3473843*3473843349585522013Catenulispora acidiphila DSM 44928, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014815:5888934*5888934590800519072Micromonospora sp. L5 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013159:1885985*1885985191176425780Saccharomonospora viridis DSM 43017, complete genome1e-0560BLASTN svgBLASTP svg
NC_003888:47504894750489477496724479Streptomyces coelicolor A3(2), complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010572:1081236*1081236110592624691Streptomyces griseus subsp. griseus NBRC 13350, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013510:81052581052583159921075Thermomonospora curvata DSM 43183, complete genome1e-20109BLASTN svgBLASTP svg