Pre_GI: BLASTN Hits

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Query: NC_009953:2808288 Salinispora arenicola CNS-205 chromosome, complete genome

Start: 2808288, End: 2834043, Length: 25756

Host Lineage: Salinispora arenicola; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Found in marine sediment, this organism produces cancer-fighting compounds. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. Salinispora arenicola produces the bioactive compounds staurosporine and rifamycin which may be useful in the treatment of cancer.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:1157476*1157476117633118856Actinosynnema mirum DSM 43827, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013093:1411882*1411882143830226421Actinosynnema mirum DSM 43827, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013093:3996197*3996197401960923413Actinosynnema mirum DSM 43827, complete genome2e-19105BLASTN svgBLASTP svg
NC_014318:51839755183975520609922125Amycolatopsis mediterranei U32 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012704:1641684*1641684166548523802Corynebacterium kroppenstedtii DSM 44385, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008278:18450001845000186972124722Frankia alni ACN14a, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_009921:66910896691089673309942011Frankia sp. EAN1pec, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014666:6940532*6940532696752226991Frankia sp. EuI1c chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015656:1592021*1592021161171419694Frankia symbiont of Datisca glomerata chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013757:14996431499643151759917957Geodermatophilus obscurus DSM 43160, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013729:2157785*2157785219409936315Kribbella flavida DSM 17836, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014391:1226922*1226922125015223231Micromonospora aurantiaca ATCC 27029 chromosome, complete genome05233BLASTN svgBLASTP svg
NC_014391:35968123596812361791421103Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-93351BLASTN svgBLASTP svg
NC_014815:56030005603000562327720278Micromonospora sp. L5 chromosome, complete genome4e-98367BLASTN svgBLASTP svg
NC_014815:1490957*1490957151776526809Micromonospora sp. L5 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_013235:1938889*1938889196008021192Nakamurella multipartita DSM 44233, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014210:25970002597000263744640447Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,6e-20107BLASTN svgBLASTP svg
NC_019673:1275627*1275627131011934493Saccharothrix espanaensis DSM 44229 complete genome5e-1487.7BLASTN svgBLASTP svg
NC_019673:46872894687289471371226424Saccharothrix espanaensis DSM 44229 complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013947:23512082351208237202720820Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015957:49635004963500498135217853Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_013595:8553904*8553904857655422651Streptosporangium roseum DSM 43021, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014165:2888961*2888961290818919229Thermobispora bispora DSM 43833 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015434:24382022438202245793719736Verrucosispora maris AB-18-032 chromosome, complete genome02240BLASTN svgBLASTP svg
NC_015434:3581001*3581001361002729027Verrucosispora maris AB-18-032 chromosome, complete genome3e-71278BLASTN svgBLASTP svg
NC_015434:1313979*1313979133209918121Verrucosispora maris AB-18-032 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg