Pre_GI: BLASTP Hits

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Query: NC_009882:100000:100851 Rickettsia rickettsii str. 'Sheila Smith', complete genome

Start: 100851, End: 102248, Length: 1398

Host Lineage: Rickettsia rickettsii; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This strain was isolated from from a patient with Rocky Mountain spotted fever. Causative agent for Rocky Mountain Spotted Fever. This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, are obligate intracellular pathogens and is composed of two groups, the spotted fever group, and the typhus group. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Rickettsia rickettsii was first identified by Dr. Howard Rickets as the causative agent of Rocky Mountain Spotted Fever, which was originally named for its geographic distribution at the time, it is now known to be widespread throughout the North American continent. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. This bacterium is an obligate intracellular pathogen that infects primarily the vascular endothelium, and occasionally smooth muscle tissue. It is passed to the human host from a tick bite, and the tick acts as both a natural reservoir and a vector for disease transmission. Once the organism is endocytosed by the host cell, it quickly escapes the phagozome, and replicates intracellularly, causing cell death and tissue damage. The disease is characterized by a spotted rash and has a high mortality rate if left untreated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016914:99184:1009371009371023341398Rickettsia rickettsii str. Hino chromosome, complete genomeNAD(p) transhydrogenase subunit beta0793
NC_016913:1066790:1066790106679010681871398Rickettsia rickettsii str. Brazil chromosome, complete genomeNAD(p) transhydrogenase subunit beta0793
NC_016909:100000:1008791008791022761398Rickettsia rickettsii str. Arizona chromosome, complete genomeNAD(p) transhydrogenase subunit beta0793
NC_016908:100000:1008841008841022811398Rickettsia rickettsii str. Colombia chromosome, complete genomeNAD(p) transhydrogenase subunit beta0793
NC_010263:100000:1008501008501022471398Rickettsia rickettsii str. Iowa, complete genomeNAD(P) transhydrogenase subunit beta0793
NC_012633:98000:98674986741000711398Rickettsia africae ESF-5, complete genomeNAD(p) transhydrogenase subunit beta0785
NC_017044:80384:1017881017881031851398Rickettsia parkeri str. Portsmouth chromosome, complete genomeNAD(p) transhydrogenase subunit beta0780
NC_017058:129474:1300891300891314861398Rickettsia australis str. Cutlack chromosome, complete genomeNAD(p) transhydrogenase subunit beta0768
NC_009881:92929:9469894698960951398Rickettsia akari str. Hartford, complete genomeNAD(p) transhydrogenase subunit beta0748
NC_017062:61500:7728377283786801398Rickettsia typhi str. B9991CWPP chromosome, complete genomeNAD(p) transhydrogenase subunit beta0704
NC_006142:57571:7686676866782631398Rickettsia typhi str. Wilmington, complete genomeNAD(P)(+) transhydrogenase (B-specific) beta subunit0704
NC_017066:57571:7686676866782631398Rickettsia typhi str. TH1527 chromosome, complete genomeNAD(p) transhydrogenase subunit beta0703
NC_000963:83408:8340883408848051398Rickettsia prowazekii str. Madrid E, complete genomeNAD(P) TRANSHYDROGENASE SUBUNIT BETA (pntB)0703
NC_017050:83406:8340683406848031398Rickettsia prowazekii str. Katsinyian chromosome, complete genomeNAD(p) transhydrogenase subunit beta0703
NC_017057:83415:8341583415848121398Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeNAD(p) transhydrogenase subunit beta0703
NC_007912:1231436:1242879124287912442971419Saccharophagus degradans 2-40, complete genomeNAD(P) transhydrogenase, beta subunit1e-119430
NC_015222:523915:5296685296685310501383Nitrosomonas sp. AL212 chromosome, complete genomeNAD(P)(+) transhydrogenase (AB-specific)6e-116417
NC_014117:442616:5067375067375081881452Burkholderia sp. CCGE1002 chromosome chromosome 1, completeNAD(P)(+) transhydrogenase (AB-specific)1e-115417
NC_013851:949973:9717279717279731271401Allochromatium vinosum DSM 180 chromosome, complete genomeNAD(P)(+) transhydrogenase (AB-specific)7e-113407
NC_013457:140474:1420391420391434151377Vibrio sp. Ex25 chromosome 2, complete genomeNAD(P) transhydrogenase subunit beta2e-109396
NC_015724:339500:3412863412863427611476Cupriavidus necator N-1 plasmid BB2p, complete sequenceNAD(P) transhydrogenase subunit beta1e-108393
NC_016628:193000:1947891947891961651377Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceNAD(P) transhydrogenase subunit beta5e-107388
NC_014966:919442:9344189344189358121395Vibrio vulnificus MO6-24/O chromosome II, complete sequenceNAD(P) transhydrogenase subunit beta4e-107388
NC_010676:304405:3071933071933086561464Burkholderia phytofirmans PsJN chromosome 2, complete sequenceNAD(P)(+) transhydrogenase (AB-specific)9e-106384
NC_015514:3351052:3377818337781833792001383Cellulomonas fimi ATCC 484 chromosome, complete genomeNAD(P)(+) transhydrogenase1e-104380
NC_013174:2455420:2455420245542024568081389Jonesia denitrificans DSM 20603, complete genomeNAD(P)(+) transhydrogenase (AB-specific)9e-104377
NC_012586:425615:4464554464554479001446Rhizobium sp. NGR234 plasmid pNGR234b, complete sequencepredicted NADP transhydrogenase beta subunit PntB2e-103376
NC_012587:713124:7209577209577224021446Rhizobium sp. NGR234, complete genomeNAD(P) transhydrogenase, beta subunit9e-102370
NC_010170:4409683:4414595441459544160101416Bordetella petrii, complete genomeNAD(P) transhydrogenase subunit beta2e-101369
NC_014215:2295500:2320424232042423218361413Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,NADH dehydrogenase3e-93342
NC_003910:4234000:4248468424846842498741407Colwellia psychrerythraea 34H, complete genomeNAD(P) transhydrogenase, beta subunit3e-91336
NC_014039:708427:7100177100177114381422Propionibacterium acnes SK137 chromosome, complete genomeNAD(P) transhydrogenase subunit beta4e-90332
NC_016511:678582:6833116833116847321422Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeNAD(P) transhydrogenase subunit beta4e-90332
NC_016512:679688:6826966826966841171422Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeNAD(P) transhydrogenase subunit beta4e-90332
NC_015436:1758257:1777655177765517790641410Spirochaeta coccoides DSM 17374 chromosome, complete genomeNAD(P)(+) transhydrogenase (AB-specific)3e-88326
NC_019673:1584739:1599399159939916007571359Saccharothrix espanaensis DSM 44229 complete genomeNAD(P) transhydrogenase subunit beta5e-87322
NC_013124:2063460:2085882208588220872941413Acidimicrobium ferrooxidans DSM 10331, complete genomeNAD(P)(+) transhydrogenase (AB-specific)2e-85316
NC_013131:9903320:9936767993676799381551389Catenulispora acidiphila DSM 44928, complete genomeNAD(P)(+) transhydrogenase (AB-specific)4e-80299
NC_013093:5653093:5657961565796156593941434Actinosynnema mirum DSM 43827, complete genomeNAD(P)(+) transhydrogenase (AB-specific)1e-72273
NC_010125:333895:3551923551923566191428Gluconacetobacter diazotrophicus PAl 5, complete genomeputative NAD(P) transhydrogenase subunit beta3e-71269
NC_011365:2637567:2659833265983326612601428Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeNAD(P)(+) transhydrogenase3e-71269
NC_018720:1468397:1481380148138014827891410Bifidobacterium asteroides PRL2011 chromosome, complete genomeNAD(P) transhydrogenase subunit beta7e-71268
NC_006087:2326143:2326143232614323275641422Leifsonia xyli subsp. xyli str. CTCB07, complete genomeNADP-transhydrogenase oxidoreductase, beta subunit1e-69264
NC_007347:1596040:160961316096131610332720Ralstonia eutropha JMP134 chromosome 1, complete sequenceCBS2e-1067.8
NC_007164:1495804:150274815027481503026279Corynebacterium jeikeium K411, complete genomeputative NAD(P) transhydrogenase, beta subunit1e-0655.1