Pre_GI: BLASTP Hits

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Query: NC_009664:4377777:4396992 Kineococcus radiotolerans SRS30216, complete genome

Start: 4396992, End: 4397840, Length: 849

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014391:3445672:346223434622343463070837Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeabortive infection protein6e-54211
NC_016113:11500:292002920030033834Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetransmembrane protein3e-45182
NC_017955:3731480:374553737455373746331795Modestobacter marinus, complete genomemetal-dependent membrane protease, Abortive infection protein2e-39162
NC_006177:1254635:127209212720921272997906Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein6e-1891.7
NC_010175:4375265:437719543771954378169975Chloroflexus aurantiacus J-10-fl, complete genomeAbortive infection protein1e-1067.4
NC_012032:4385311:438724143872414388215975Chloroflexus sp. Y-400-fl, complete genomeAbortive infection protein1e-1067.4
NC_008593:2457594:247717824771782478074897Clostridium novyi NT, complete genomeCAAX amino terminal protease family protein4e-0962
NC_015425:2690448:271015727101572711029873Clostridium botulinum BKT015925 chromosome, complete genomeCAAX amino terminal protease family protein7e-0754.7
NC_016610:1974527:199007819900781990965888Tannerella forsythia ATCC 43037 chromosome, complete genomeCAAX amino terminal protease family protein9e-0754.3
NC_007426:205390:209283209283210242960Natronomonas pharaonis DSM 2160, complete genomehypothetical protein3e-0652.4