Pre_GI: BLASTP Hits

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Query: NC_009664:4377777:4394492 Kineococcus radiotolerans SRS30216, complete genome

Start: 4394492, End: 4395079, Length: 588

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:590500:602829602829603446618Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator1e-44179
NC_016109:954538:970248970248970856609Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator4e-1374.3
NC_019673:6473743:647426064742606474844585Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family9e-1270.1
NC_008095:5527707:553484855348485535489642Myxococcus xanthus DK 1622, complete genometranscriptional regulator, TetR family4e-1064.3
NC_015711:7471500:747851474785147479170657Myxococcus fulvus HW-1 chromosome, complete genomeTetR family transcriptional regulator2e-0962.4
NC_016113:1143580:115842411584241159002579Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator1e-0859.7
NC_020126:6344827:635200863520086352640633Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator2e-0858.5
NC_016109:5290000:530396553039655304555591Kitasatospora setae KM-6054, complete genomeputative TetR family transcriptional regulator1e-0756.6
NC_016114:7252500:727184372718437272460618Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR8e-0753.5
NC_016641:438500:455047455047455622576Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_011768:3385719:341889634188963419528633Desulfatibacillum alkenivorans AK-01, complete genometranscriptional regulator, TetR family5e-0650.8