Pre_GI: BLASTP Hits

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Query: NC_009439:4734237:4755724 Pseudomonas mendocina ymp, complete genome

Start: 4755724, End: 4756350, Length: 627

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014310:1750817:176508117650811765713633Ralstonia solanacearum PSI07 megaplasmid, complete sequencemethyltransferase2e-85315
NC_007948:1972290:197517319751731975808636Polaromonas sp. JS666, complete genomehypothetical protein7e-80296
NC_013282:551219:557440557440558018579Cronobacter turicensis, complete genomehypothetical protein2e-2099
NC_016642:757964:772708772708773427720Pseudovibrio sp. FO-BEG1 chromosome, complete genomeTellurite resistance protein-related protein2e-1892
NC_008536:7546973:755580175558017556430630Solibacter usitatus Ellin6076, complete genomeMethyltransferase type 116e-1890.5
NC_017068:1143515:114627811462781146886609Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein7e-1787
NC_016612:2009927:201385120138512014429579Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein9e-1683.6
NC_014562:3985500:399000339900033990680678Pantoea vagans C9-1 chromosome, complete genome3-demethylubiquinone-9 3-methyltransferase1e-1583.2
NC_011894:983572:100125010012501001918669Methylobacterium nodulans ORS 2060, complete genomeMethyltransferase type 112e-1479.3
NC_005139:2201820:220411722041172204704588Vibrio vulnificus YJ016 chromosome I, complete sequencetellurite resistance protein-related protein3e-1478.2
NC_013165:329185:372456372456373064609Slackia heliotrinireducens DSM 20476, complete genomemethyltransferase family protein6e-1477.4
NC_015152:2887414:289136828913682891943576Spirochaeta sp. Buddy chromosome, complete genomemethyltransferase type 111e-1376.6
NC_012881:1802000:180958918095891810170582Desulfovibrio salexigens DSM 2638, complete genomeMethyltransferase type 115e-1374.3
NC_012691:1743038:176428417642841764787504Tolumonas auensis DSM 9187, complete genomeMethyltransferase type 127e-1373.9
NC_014815:6779538:677953867795386780179642Micromonospora sp. L5 chromosome, complete genomemethyltransferase type 119e-1373.6
NC_009900:73804:744187441874849432Rickettsia massiliae MTU5, complete genomeTellurite resistance protein-related protein9e-1373.6
NC_016112:1330500:133206313320631332683621Methylomicrobium alcaliphilum chromosome, complete genomeSAM-dependent methyltransferase1e-1169.7
NC_019902:3397170:3397170339717034012584089Thioalkalivibrio nitratireducens DSM 14787, complete genomeHelicase-related protein4e-1168.2
NC_009380:2548878:257183725718372572589753Salinispora tropica CNB-440 chromosome, complete genometype 11 methyltransferase2e-1065.5
NC_016109:954538:957009957009957674666Kitasatospora setae KM-6054, complete genomeputative methyltransferase5e-1064.3
NC_002505:860789:869813869813870391579Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetellurite resistance protein-related protein7e-1063.9
NC_009457:351512:360536360536361114579Vibrio cholerae O395 chromosome 2, complete sequencetellurite resistance protein-like protein7e-1063.9
NC_012578:818241:827265827265827843579Vibrio cholerae M66-2 chromosome I, complete sequencetellurite resistance protein-like protein7e-1063.9
NC_012582:882931:891955891955892533579Vibrio cholerae O395 chromosome chromosome I, complete sequencetellurite resistance protein-related protein7e-1063.9
NC_012668:2744393:279341327934132793991579Vibrio cholerae MJ-1236 chromosome 1, complete sequencetellurite resistance protein-related protein7e-1063.9
NC_016445:338288:347312347312347890579Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetellurite resistance protein-related protein7e-1063.9
NC_016944:859492:866832866832867410579Vibrio cholerae IEC224 chromosome I, complete sequencetellurite resistance protein-like protein7e-1063.9
NC_008825:1258500:128220812822081282852645Methylibium petroleiphilum PM1, complete genometellurite resistance related protein6e-0960.8
NC_007969:1095438:110455811045581105184627Psychrobacter cryohalolentis K5, complete genomeMethyltransferase type 126e-0960.8
NC_012108:4454705:447225644722564472888633Desulfobacterium autotrophicum HRM2, complete genometype II restriction-modification system, methylation subunit5e-0754.3
NC_013971:3296272:3313568331356833149201353Erwinia amylovora ATCC 49946 chromosome, complete genomemethyltransferase1e-0653.5
NC_013961:441719:4563684563684577321365Erwinia amylovora, complete genomehypothetical protein1e-0653.5
NC_016113:1143580:115064611506461151500855Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein3e-0651.6
NC_013093:2547608:255436425543642554993630Actinosynnema mirum DSM 43827, complete genomeMethyltransferase type 116e-0650.8
NC_010505:2690939:2712198271219827132441047Methylobacterium radiotolerans JCM 2831, complete genomeMethyltransferase type 119e-0650.1