Pre_GI: BLASTP Hits

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Query: NC_009439:4734237:4751707 Pseudomonas mendocina ymp, complete genome

Start: 4751707, End: 4752633, Length: 927

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010002:5691968:571590857159085716873966Delftia acidovorans SPH-1, complete genomeRhodanese domain protein2e-115415
NC_017026:3466809:347802334780233478856834Mycobacterium tuberculosis RGTB327 chromosome, complete genomethiosulfate sulfurtransferase7e-78290
NC_009525:3484924:349613034961303496963834Mycobacterium tuberculosis H37Ra, complete genomethiosulfate sulfurtransferase CysA37e-78290
NC_009565:3485772:349709734970973497930834Mycobacterium tuberculosis F11, complete genomethiosulfate sulfurtransferase cysA37e-78290
NC_002755:3465582:347977134797713480604834Mycobacterium tuberculosis CDC1551, complete genomethiosulfate sulfurtransferase7e-78290
NC_000962:3474000:348397434839743484807834Mycobacterium tuberculosis H37Rv, complete genomePROBABLE THIOSULFATE SULFURTRANSFERASE CYSA3 (RHODANESE-LIKE PROTEIN) (THIOSULFATE CYANIDE TRANSSULFURASE) (THIOSULFATE THIOTRANSFERASE)7e-78290
NC_008699:4443000:447154144715414472389849Nocardioides sp. JS614, complete genomeRhodanese domain protein9e-77286
NC_009380:336024:338241338241339146906Salinispora tropica CNB-440 chromosome, complete genomerhodanese domain-containing protein7e-76284
NC_016943:1810417:182690418269041827731828Blastococcus saxobsidens DD2, complete genome3-mercaptopyruvate sulfurtransferase6e-73274
NC_014221:1167261:117013311701331171002870Truepera radiovictrix DSM 17093 chromosome, complete genomeThiosulfate sulfurtransferase2e-70266
NC_016804:3407859:341782534178253418787963Mycobacterium bovis BCG str. Mexico chromosome, complete genomethiosulfate sulfurtransferase2e-69263
NC_002945:3429315:344052134405213441483963Mycobacterium bovis AF2122/97, complete genomethiosulfate sulfurtransferase CysA32e-69263
NC_012207:3421144:343111034311103432072963Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative thiosulfate sulfurtransferase2e-69263
NC_008769:3427254:343846034384603439422963Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative thiosulfate sulfurtransferase cysA32e-69263
NC_012526:2317862:233376223337622334622861Deinococcus deserti VCD115, complete genomeputative thiosulfate sulfurtransferase (Rhodanese)8e-68257
NC_009376:794562:796958796958797806849Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomethiosulfate sulfurtransferase6e-66251
NC_012589:2379709:237970923797092380590882Sulfolobus islandicus L.S.2.15, complete genomeRhodanese domain protein7e-62237
NC_014814:4326500:434542743454274346332906Mycobacterium sp. Spyr1 chromosome, complete genomerhodanese-related sulfurtransferase1e-60233
NC_003106:1786000:180210918021091802912804Sulfolobus tokodaii str. 7, complete genomehypothetical thiosulfate sulfurtransferase3e-48192
NC_012632:1212780:122846112284611229282822Sulfolobus islandicus M.16.27 chromosome, complete genomeRhodanese domain-containing protein3e-46186
NC_012588:1118945:113801011380101138831822Sulfolobus islandicus M.14.25 chromosome, complete genomerhodanese9e-46184
NC_011831:1969792:197383819738381974713876Chloroflexus aggregans DSM 9485, complete genomeRhodanese domain protein4e-36152
NC_014034:3570034:358387635838763584733858Rhodobacter capsulatus SB1003 chromosome, complete genome3-mercaptopyruvate sulfurtransferase2e-33143
NC_014633:681198:700814700814701728915Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceRhodanese domain-containing protein2e-32139
NC_011420:1178762:119338811933881194254867Rhodospirillum centenum SW, complete genome3-mercaptopyruvate sulfurtransferase5e-29128
NC_011884:2817054:282059528205952821578984Cyanothece sp. PCC 7425, complete genomeRhodanese domain protein9e-29127
NC_018868:3229381:323026932302693231066798Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein2e-28126
NC_014228:1336466:135089413508941351733840Xenorhabdus nematophila ATCC 19061, complete genome3-mercaptopyruvate sulfurtransferase3e-28125
NC_017297:2796000:281152528115252812499975Clostridium botulinum F str. 230613 chromosome, complete genomeputative thiosulfate sulfurtransferase8e-27120
NC_010730:1211506:121913112191311220048918Sulfurihydrogenibium sp. YO3AOP1, complete genomeRhodanese domain protein2e-25116
NC_011894:6485500:648556264855626486404843Methylobacterium nodulans ORS 2060, complete genomeRhodanese domain protein4e-25115
NC_012438:1301960:131816713181671319084918Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomehypothetical protein3e-24112
NC_017317:51428:634956349564313819Corynebacterium ulcerans 809 chromosome, complete genomethiosulfate sulfurtransferase9e-24110
NC_012440:609659:610422610422611387966Persephonella marina EX-H1, complete genomerhodanese domain protein2e-23110
NC_010162:9641549:964411296441129644984873Sorangium cellulosum 'So ce 56', complete genomethiosulfate sulfurtransferase3e-23109
NC_019897:3810000:382377038237703824609840Thermobacillus composti KWC4 chromosome, complete genomerhodanese-related sulfurtransferase2e-1996.7
NC_014329:2036812:204031420403142041150837Corynebacterium pseudotuberculosis FRC41 chromosome, completethiosulfate sulfurtransferase4e-1995.9
NC_016781:2035543:204024720402472041083837Corynebacterium pseudotuberculosis 3/99-5 chromosome, completethiosulfate sulfurtransferase sseB4e-1995.9
NC_017031:2036500:204008320400832040919837Corynebacterium pseudotuberculosis P54B96 chromosome, completeThiosulfate sulfurtransferase sseB4e-1995.9
NC_017303:2036500:204011920401192040955837Corynebacterium pseudotuberculosis I19 chromosome, complete genomeThiosulfate sulfurtransferase sseB4e-1995.9
NC_017305:2034207:203770920377092038545837Corynebacterium pseudotuberculosis PAT10 chromosome, completeThiosulfate sulfurtransferase sseB4e-1995.9
NC_016932:2007001:201170320117032012539837Corynebacterium pseudotuberculosis 316 chromosome, complete genomethiosulfate sulfurtransferase sseB4e-1995.5
NC_017317:2181284:218288621828862183722837Corynebacterium ulcerans 809 chromosome, complete genomethiosulfate sulfurtransferase5e-1995.1
NC_015683:2279904:228217122821712283007837Corynebacterium ulcerans BR-AD22 chromosome, complete genomethiosulfate sulfurtransferase5e-1995.1
NC_008347:1636660:163989616398961640726831Maricaulis maris MCS10, complete genome3-mercaptopyruvate sulfurtransferase7e-1994.7
NC_017300:2034000:203761820376182038454837Corynebacterium pseudotuberculosis 1002 chromosome, completeThiosulfate sulfurtransferase sseB1e-1894
NC_016641:5671186:567339056733905674238849Paenibacillus terrae HPL-003 chromosome, complete genome3-mercaptopyruvate sulfurtransferase1e-1894
NC_016782:2088858:210424521042452105069825Corynebacterium diphtheriae 241 chromosome, complete genomethiosulfate sulfurtransferase2e-1893.6
NC_016800:2127200:214283021428302143654825Corynebacterium diphtheriae BH8 chromosome, complete genomethiosulfate sulfurtransferase2e-1893.6
NC_014483:3629282:363144336314433632306864Paenibacillus polymyxa E681 chromosome, complete genomeProbable 3-mercaptopyruvate sulfurtransferase (Rhodanese-like protein)7e-1891.7
NC_016801:1255611:129486512948651295608744Corynebacterium diphtheriae C7 (beta) chromosome, complete genomethiosulfate sulfurtransferase4e-1789
NC_014622:3955851:395687039568703957733864Paenibacillus polymyxa SC2 chromosome, complete genome3-mercaptopyruvate sulfurtransferase6e-1788.2
NC_013174:650986:670666670666671583918Jonesia denitrificans DSM 20603, complete genomeRhodanese domain protein1e-1687.8
NC_004193:375416:564994564994565839846Oceanobacillus iheyensis HTE831, complete genomethiosulfate sulfurtransferase2e-1686.7
NC_015566:3417951:343878834387883439618831Serratia sp. AS12 chromosome, complete genome3-mercaptopyruvate sulfurtransferase3e-1685.9
NC_016788:1214026:124916012491601249903744Corynebacterium diphtheriae HC04 chromosome, complete genomethiosulfate sulfurtransferase5e-1685.5
NC_002935:1237585:127605812760581276807750Corynebacterium diphtheriae NCTC 13129, complete genomePutative sulfurtransferase1e-1584.3
NC_012914:569471:596205596205597041837Paenibacillus sp. JDR-2, complete genomeRhodanese domain protein9e-1684.3
NC_016800:1243000:127831512783151279064750Corynebacterium diphtheriae BH8 chromosome, complete genomethiosulfate sulfurtransferase9e-1684.3
NC_018678:2382708:238639723863972387227831Alteromonas macleodii str. 'English Channel 673' chromosome,rhodanese-related sulfurtransferase4e-1582.4
NC_003450:2938404:295951829595182960342825Corynebacterium glutamicum ATCC 13032, complete genomethiosulfate sulfurtransferase2e-1479.7
NC_006958:2911711:293282329328232933647825Corynebacterium glutamicum ATCC 13032, complete genomePROBABLE THIOSULFATE SULFURTRANSFERASE PROTEIN2e-1479.7
NC_016629:3543432:354878835487883549738951Desulfovibrio africanus str. Walvis Bay chromosome, completerhodanese-like protein8e-1478.2
NC_014150:2399997:239999723999972400971975Brachyspira murdochii DSM 12563 chromosome, complete genomeRhodanese domain protein3e-1375.9
NC_012563:1348500:1355362135536213567441383Clostridium botulinum A2 str. Kyoto, complete genomeputative thiosulfate sulfurtransferase4e-1375.5
NC_012590:2501593:252033325203332521184852Corynebacterium aurimucosum ATCC 700975, complete genomethiosulfate sulfurtransferase5e-1375.5
NC_015312:5240653:525850852585085259377870Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3-mercaptopyruvate sulfurtransferase6e-1375.1
NC_008553:1156285:115798211579821158677696Methanosaeta thermophila PT, complete genomeRhodanese domain protein4e-1272.4
NC_016609:606000:626967626967627809843Niastella koreensis GR20-10 chromosome, complete genome3-mercaptopyruvate sulfurtransferase4e-1168.9
NC_015416:2692536:2691413269141326925521140Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein1e-0964.3
NC_006526:1472781:147823914782391479117879Zymomonas mobilis subsp. mobilis ZM4, complete genomethiosulfate sulfurtransferase2e-0963.5
NC_012704:947409:9582849582849594501167Corynebacterium kroppenstedtii DSM 44385, complete genomeputative thiosulfate sulfurtransferase6e-0858.5
NC_015416:2692536:2692536269253626942151680Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein8e-0858.2
NC_016783:1274000:127437712743771274751375Corynebacterium diphtheriae INCA 402 chromosome, complete genome3e-0756.2