Pre_GI: BLASTP Hits

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Query: NC_009439:4734237:4740488 Pseudomonas mendocina ymp, complete genome

Start: 4740488, End: 4741822, Length: 1335

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:2427120:2475278247527824766391362Pseudomonas mendocina ymp, complete genomechromate transporter8e-178623
NC_016830:4639388:4639388463938846407461359Pseudomonas fluorescens F113 chromosome, complete genomeChrA protein4e-163574
NC_016616:1182125:1190260119026011916241365Dechlorosoma suillum PS chromosome, complete genomecchromate ion transporter7e-161566
NC_015222:1843093:1857350185735018587171368Nitrosomonas sp. AL212 chromosome, complete genomechromate transporter, chromate ion transporter (CHR) family2e-160565
NC_009659:3384997:3413690341369034150631374Janthinobacterium sp. Marseille chromosome, complete genomechromate transport protein chrA2e-156552
NC_014733:1073540:1089863108986310912241362Methylovorus sp. MP688 chromosome, complete genomechromate transporter, chromate ion transporter (chr) family8e-137487
NC_010002:3357752:3378328337832833796861359Delftia acidovorans SPH-1, complete genomechromate transporter, chromate ion transporter (CHR) family4e-134478
NC_015138:765497:7934167934167947651350Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completechromate transporter, chromate ion transporter (CHR) family1e-111404
NC_010511:6756000:6777485677748567788851401Methylobacterium sp. 4-46 chromosome, complete genomechromate transporter1e-94347
NC_008740:3520500:3536799353679935382501452Marinobacter aquaeolei VT8, complete genomechromate transporter, chromate ion transporter (CHR) family5e-90332
NC_015510:2209663:2225082222508222264221341Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomechromate transporter6e-89328
NC_012527:288207:2908652908652922591395Deinococcus deserti VCD115 plasmid 1, complete sequencechromate transport; membrane protein2e-80300
NC_009254:637952:6747016747016761251425Burkholderia vietnamiensis G4 chromosome 3, complete sequencechromate transporter2e-80300
NC_009256:1782000:1800135180013518015531419Burkholderia vietnamiensis G4 chromosome 1, complete sequencechromate transporter2e-80299
NC_008268:3233961:3251744325174432531471404Rhodococcus sp. RHA1, complete genomeprobable chromate transporter, chromate ion transporter family5e-76285
NC_008687:302450:3141483141483155121365Paracoccus denitrificans PD1222 chromosome 2, complete sequencechromate transporter, chromate ion transporter (CHR) family1e-74280
NC_007722:2172000:2193912219391221951831272Erythrobacter litoralis HTCC2594, complete genomeputative chromate transport protein2e-71269
NC_013526:835117:8488288488288499881161Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomechromate transporter, chromate ion transporter (CHR) family1e-29130
NC_011992:1912200:1919307191930719205091203Acidovorax ebreus TPSY, complete genomechromate transporter, chromate ion transporter (CHR) family9e-27121
NC_014973:595153:5985025985025996561155Geobacter sp. M18 chromosome, complete genomechromate transporter, chromate ion transporter (CHR) family2e-25117
NC_018080:3088866:3089186308918630904361251Pseudomonas aeruginosa DK2 chromosome, complete genomechromate resistance protein3e-22106
NC_008212:1347000:1356235135623513575931359Haloquadratum walsbyi DSM 16790, complete genomechromate transport protein6e-22105
NC_013156:980888:1003784100378410049471164Methanocaldococcus fervens AG86, complete genomechromate transporter, chromate ion transporter (CHR) family2e-20100
NC_003296:673790:6975766975766987811206Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE CHROMATE TRANSPORT TRANSMEMBRANE PROTEIN2e-20100
NC_009254:637952:6721886721886733751188Burkholderia vietnamiensis G4 chromosome 3, complete sequencechromate transporter7e-1995.5
NC_009256:1782000:1797616179761617988031188Burkholderia vietnamiensis G4 chromosome 1, complete sequencechromate transporter7e-1995.5
NC_008391:2045348:2071616207161620727941179Burkholderia cepacia AMMD chromosome 2, complete sequencechromate transporter, chromate ion transporter (CHR) family6e-1995.5
NC_010552:58294:9866098660998381179Burkholderia ambifaria MC40-6 chromosome 2, complete sequencechromate transporter, chromate ion transporter (CHR) family6e-1995.5
NC_009441:3522519:3542235354223535433651131Flavobacterium johnsoniae UW101 chromosome, complete genomechromate transporter9e-1995.1
NC_016077:1876119:187715118771511877774624Acidaminococcus intestini RyC-MR95 chromosome, complete genomechromate transporter7e-1789
NC_015519:2580310:259719725971972597790594Tepidanaerobacter sp. Re1 chromosome, complete genomechromate transporter2e-1480.9
NC_014364:1116439:113598311359831136543561Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeChromate transporter2e-1480.9
NC_010002:1879220:192418419241841924567384Delftia acidovorans SPH-1, complete genomehypothetical protein2e-1480.9
NC_014209:2257316:226389422638942264412519Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Chromate transporter5e-1479.3
NC_006347:3760447:378591037859103786452543Bacteroides fragilis YCH46, complete genomechromate transport protein6e-1479
NC_016776:3714642:374010737401073740649543Bacteroides fragilis 638R, complete genomeputative chromate transport protein7e-1479
NC_003228:3690596:369461636946163695158543Bacteroides fragilis NCTC 9343, complete genomeputative chromate transport protein7e-1479
NC_014209:2257316:226440922644092264999591Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Chromate transporter2e-1377.4
NC_003228:3690596:369518436951843695732549Bacteroides fragilis NCTC 9343, complete genomeputative hromate transport membrane protein3e-1377
NC_016776:3714642:374067537406753741223549Bacteroides fragilis 638R, complete genomeputative chromate transport membrane protein3e-1377
NC_013921:2375900:238299123829912383581591Thermoanaerobacter italicus Ab9 chromosome, complete genomeChromate transporter3e-1377
NC_006347:3760447:378647837864783787026549Bacteroides fragilis YCH46, complete genomechromate transport protein3e-1377
NC_015519:2580310:259778725977872598362576Tepidanaerobacter sp. Re1 chromosome, complete genomechromate transporter4e-1376.6
NC_010320:2397395:240428324042832404801519Thermoanaerobacter sp. X514 chromosome, complete genomechromate transporter6e-1375.9
NC_014538:2396559:240344724034472403965519Thermoanaerobacter sp. X513 chromosome, complete genomeChromate transporter6e-1375.9
NC_008261:2770468:278438627843862784937552Clostridium perfringens ATCC 13124, complete genomechromate transport protein8e-1375.5
NC_014964:2301835:230550223055022306020519Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeChromate transporter8e-1375.5
NC_010321:2319820:232348723234872324005519Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completechromate transporter8e-1375.5
NC_008262:2433979:244788324478832448434552Clostridium perfringens SM101, complete genomechromate transport protein9e-1375.1
NC_007964:2152000:2154867215486721561591293Nitrobacter hamburgensis X14, complete genomeChromate transporter9e-1375.1
NC_013921:2375900:238247623824762382994519Thermoanaerobacter italicus Ab9 chromosome, complete genomeChromate transporter1e-1275.1
NC_014964:2301835:230601723060172306601585Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeChromate transporter9e-1272
NC_011184:597496:6145146145146156651152Vibrio fischeri MJ11 chromosome I, complete sequencechromate transport protein9e-1272
NC_003909:4854379:4901234490123449024151182Bacillus cereus ATCC 10987, complete genomechromate ion transporter8e-1272
NC_014538:2396559:240396224039622404546585Thermoanaerobacter sp. X513 chromosome, complete genomeChromate transporter1e-1171.6
NC_016012:16134:340193401934564546Candidatus Arthromitus sp. SFB-rat-Yit, complete genomechromate transport protein2e-1170.5
NC_011565:620801:632927632927633454528Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative chromate exporter3e-1170.1
NC_016613:2759908:2767626276762627687651140Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein4e-1169.7
NC_014479:3510972:351038235103823510975594Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative anion transporter4e-1169.7
NC_010718:237962:239828239828240346519Natranaerobius thermophilus JW/NM-WN-LF, complete genomeChromate transporter6e-1169.3
NC_011071:2207385:2219739221973922209411203Stenotrophomonas maltophilia R551-3, complete genomechromate transporter, chromate ion transporter (CHR) family6e-1168.9
NC_020410:3440327:344426134442613444851591Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative anion transporter8e-1168.6
NC_015519:2580310:260171526017152602278564Tepidanaerobacter sp. Re1 chromosome, complete genomechromate transporter1e-1068.2
NC_010320:2397395:240479824047982405337540Thermoanaerobacter sp. X514 chromosome, complete genomechromate transporter1e-1068.2
NC_010321:2319820:232400223240022324541540Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completechromate transporter1e-1068.2
NC_015422:1694363:1694363169436316955921230Alicycliphilus denitrificans K601 chromosome, complete genomechromate transporter2e-1067
NC_009725:3447336:345137734513773451967591Bacillus amyloliquefaciens FZB42, complete genomeYwrB2e-1067
NC_017191:3483231:348858634885863489176591Bacillus amyloliquefaciens XH7 chromosome, complete genomechromate transporter5e-1065.9
NC_017190:3528229:353374535337453534335591Bacillus amyloliquefaciens LL3 chromosome, complete genomeanion transporter5e-1065.9
NC_017188:3482500:348692334869233487513591Bacillus amyloliquefaciens TA208 chromosome, complete genomeanion transporter5e-1065.9
NC_014551:3515462:351974835197483520338591Bacillus amyloliquefaciens DSM 7, complete genomeanion transporter5e-1065.9
NC_020272:430500:446546446546447136591Bacillus amyloliquefaciens IT-45, complete genomeputative transporter ywrB6e-1065.9
NC_009767:2866668:2889069288906928902741206Roseiflexus castenholzii DSM 13941, complete genomechromate transporter, chromate ion transporter (CHR) family8e-1065.5
NC_009725:3447336:345196434519643452500537Bacillus amyloliquefaciens FZB42, complete genomeYwrA8e-1065.5
NC_018515:937994:938902938902939429528Desulfosporosinus meridiei DSM 13257 chromosome, complete genomechromate transport protein ChrA7e-1065.5
NC_011751:4992500:4996740499674049979451206Escherichia coli UMN026 chromosome, complete genomeputative chromate ion transporter9e-1065.1
NC_017191:3483231:348919434891943489709516Bacillus amyloliquefaciens XH7 chromosome, complete genomeanion transporter1e-0965.1
NC_020410:3440327:344484834448483445384537Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative anion transporter1e-0964.7
NC_014551:3515462:352033535203353520871537Bacillus amyloliquefaciens DSM 7, complete genomeanion transporter1e-0964.7
NC_017188:3482500:348751034875103488046537Bacillus amyloliquefaciens TA208 chromosome, complete genomechromate transporter1e-0964.7
NC_014479:3510972:351097235109723511508537Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative anion transporter1e-0964.7
NC_017190:3528229:353435335343533534868516Bacillus amyloliquefaciens LL3 chromosome, complete genomeanion transporter1e-0964.7
NC_020272:430500:446013446013446549537Bacillus amyloliquefaciens IT-45, complete genomechromate transporter1e-0964.7
NC_009439:2427120:2459480245948024606851206Pseudomonas mendocina ymp, complete genomechromate transporter2e-0964.3
NC_016109:7631165:7651947765194776532751329Kitasatospora setae KM-6054, complete genomeputative chromate transporter2e-0964.3
NC_010718:237962:240346240346240810465Natranaerobius thermophilus JW/NM-WN-LF, complete genomeChromate transporter2e-0963.9
NC_007645:2922190:2924318292431829255291212Hahella chejuensis KCTC 2396, complete genomeChromate transport protein ChrA3e-0963.5
NC_013315:3689422:369585836958583696370513Clostridium difficile CD196 chromosome, complete genomechromate transport protein3e-0963.5
NC_015723:1347946:1349846134984613510751230Cupriavidus necator N-1 chromosome 2, complete sequencechromate transport protein ChrA3e-0963.5
NC_010581:709626:728169728169728765597Beijerinckia indica subsp. indica ATCC 9039, complete genomeChromate transporter6e-0962.4
NC_007952:3283394:330698433069843307724741Burkholderia xenovorans LB400 chromosome 2, complete sequence1e-0861.2
NC_014364:1116439:113654011365401137112573Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeChromate transporter2e-0860.8
NC_014831:866614:879221879221879760540Thermaerobacter marianensis DSM 12885 chromosome, complete genomeChromate transporter2e-0860.8
NC_013171:1731491:174841417484141748965552Anaerococcus prevotii DSM 20548, complete genomeChromate transporter9e-0858.5
NC_014633:655693:669265669265669831567Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencechromate transporter1e-0758.5
NC_010511:1122529:1139640113964011408361197Methylobacterium sp. 4-46 chromosome, complete genomechromate transporter2e-0757.8
NC_015519:2580310:260117626011762601718543Tepidanaerobacter sp. Re1 chromosome, complete genomechromate transporter2e-0757.4
NC_014963:2759978:277990027799002780244345Terriglobus saanensis SP1PR4 chromosome, complete genome2e-0757
NC_014910:2585747:260734026073402607930591Alicycliphilus denitrificans BC chromosome, complete genomechromate transporter7e-0755.5
NC_016609:7819243:7824456782445678257301275Niastella koreensis GR20-10 chromosome, complete genomechromate ion transporter family chromate transporter1e-0655.1
NC_014633:655693:669828669828670358531Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencechromate transporter1e-0654.7
NC_008343:823093:824110824110824703594Granulibacter bethesdensis CGDNIH1, complete genomechromate transport protein2e-0654.3
NC_013315:3689422:369635836963583696885528Clostridium difficile CD196 chromosome, complete genomechromate transport protein1e-0552