Pre_GI: BLASTP Hits

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Query: NC_009439:4734237:4736372 Pseudomonas mendocina ymp, complete genome

Start: 4736372, End: 4737520, Length: 1149

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:6499234:6500024650002465011721149Pseudomonas fluorescens F113 chromosome, complete genomeprotein SsuD0692
NC_014121:2745097:2745097274509727462421146Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completealkanesulfonate monooxygenase4e-175613
NC_021066:2197490:2197490219749021986351146Raoultella ornithinolytica B6, complete genomealkanesulfonate monooxygenase5e-164577
NC_016023:1839503:1840504184050418416371134Bacillus coagulans 36D1 chromosome, complete genomealkanesulfonate monooxygenase, FMNH(2)-dependent7e-145513
NC_010508:1705500:1705583170558317067401158Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceAlkanesulfonate monooxygenase5e-133474
NC_008542:1727000:1727063172706317282201158Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceAlkanesulfonate monooxygenase1e-132473
NC_008060:1182378:1182378118237811835351158Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceAlkanesulfonate monooxygenase1e-132473
NC_010296:2695186:2705779270577927068971119Microcystis aeruginosa NIES-843, complete genomealiphatic sulfonate monooxygenase1e-130466
NC_009659:1129066:1148354114835411494811128Janthinobacterium sp. Marseille chromosome, complete genomealkanesulfonate monooxygenase4e-117421
NC_013510:517878:5352065352065363691164Thermomonospora curvata DSM 43183, complete genomeAlkanesulfonate monooxygenase2e-100366
NC_019673:9084045:9098660909866090998021143Saccharothrix espanaensis DSM 44229 complete genomeAlkanesulfonate monooxygenase4e-92338
NC_013406:1217385:1263854126385412649961143Paenibacillus sp. Y412MC10 chromosome, complete genomeAlkanesulfonate monooxygenase2e-88326
NC_014221:1167261:1173177117317711742861110Truepera radiovictrix DSM 17093 chromosome, complete genomeAlkanesulfonate monooxygenase8e-60231
NC_012969:142000:1430961430961442681173Methylovorus glucosetrophus SIP3-4 chromosome, complete genomealkanesulfonate monooxygenase2e-52206
NC_008027:3677500:3688065368806536892161152Pseudomonas entomophila L48, complete genomealkanesulfonate monooxygenase3e-49196
NC_012791:4079062:4100395410039541015041110Variovorax paradoxus S110 chromosome 1, complete genomeAlkanesulfonate monooxygenase7e-41168
NC_020064:3998715:4028208402820840292901083Serratia marcescens FGI94, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase7e-41168
NC_010725:5217260:5233190523319052342871098Methylobacterium populi BJ001, complete genomeAlkanesulfonate monooxygenase1e-38160
NC_013172:3093467:3118831311883131199551125Brachybacterium faecium DSM 4810, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase4e-35149
NC_009485:3461051:3462256346225634633591104Bradyrhizobium sp. BTAi1 chromosome, complete genomesulfonate monooxygenase3e-32139
NC_012969:142000:1420241420241430851062Methylovorus glucosetrophus SIP3-4 chromosome, complete genomealkanesulfonate monooxygenase3e-27122
NC_010557:316000:3380693380693391721104Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceLuciferase-like monooxygenase4e-26119
NC_011283:2323687:2336190233619023373171128Klebsiella pneumoniae 342 chromosome, complete genomemonooxygenase, luciferase family6e-24112
NC_010296:2695186:2710629271062927117261098Microcystis aeruginosa NIES-843, complete genomealkanesulfonate monooxygenase2e-23110
NC_011894:5056901:5085098508509850861981101Methylobacterium nodulans ORS 2060, complete genomeLuciferase-like monooxygenase7e-23108
NC_007952:444616:4468894468894479501062Burkholderia xenovorans LB400 chromosome 2, complete sequenceAlkanesulfonate monooxygenase1e-21104
NC_016631:6081384:6102677610267761037351059Granulicella mallensis MP5ACTX8 chromosome, complete genomeAlkanesulfonate monooxygenase6e-21102
NC_015566:547387:5765195765195776101092Serratia sp. AS12 chromosome, complete genomealkanesulfonate monooxygenase5e-21102
NC_015567:547500:5767055767055777961092Serratia sp. AS9 chromosome, complete genomealkanesulfonate monooxygenase5e-21102
NC_013172:3093467:3110773311077331118281056Brachybacterium faecium DSM 4810, complete genomeflavin-dependent oxidoreductase, F420-dependent methylene-tetrahydromethanopterin reductase4e-1789.4
NC_010296:2695186:2709065270906527101141050Microcystis aeruginosa NIES-843, complete genomealkanesulfonate monooxygenase2e-1686.7
NC_015954:1986705:1998544199854419997101167Halophilic archaeon DL31 chromosome, complete genomealkanesulfonate monooxygenase4e-1479.3
NC_015312:1371530:1393925139392513950281104Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeluciferase-like protein5e-1479
NC_013892:1503162:1545802154580215468571056Xenorhabdus bovienii SS-2004 chromosome, complete genomeluciferase-like ATPase domain-containing protein2e-1377.4
NC_010628:2136995:2141654214165421430211368Nostoc punctiforme PCC 73102, complete genomemonooxygenase-like protein3e-1273.2
NC_015276:1531159:1531159153115915322441086Marinomonas mediterranea MMB-1 chromosome, complete genomepyrimidine utilization protein A1e-1171.2
NC_021171:2019755:2035151203515120362031053Bacillus sp. 1NLA3E, complete genomehypothetical protein3e-1169.7
NC_013131:7945280:798226479822647982749486Catenulispora acidiphila DSM 44928, complete genomehypothetical protein7e-1168.6
NC_010628:2136995:2140175214017521415391365Nostoc punctiforme PCC 73102, complete genomemonooxygenase-like protein1e-1068.2
NC_010162:7824878:7839045783904578404031359Sorangium cellulosum 'So ce 56', complete genomenitrilotriacetate monooxygenase component A4e-1066.2
NC_008800:2127918:2129142212914221302451104Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,alkanesulfonate monooxygenase1e-0964.7
NC_007492:3180480:3226286322628632276591374Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-0963.9
NC_008596:4152916:4157064415706441584101347Mycobacterium smegmatis str. MC2 155, complete genomemonoxygenase2e-0963.5
NC_010407:410918:4125254125254139671443Clavibacter michiganensis subsp. sepedonicus chromosome, completehypothetical protein9e-0961.6
NC_015376:2061990:2082163208216320835541392Burkholderia gladioli BSR3 chromosome chromosome 2, completePutative monooxygenase, DszA family protein9e-0961.6
NC_008596:4152916:4158407415840741598221416Mycobacterium smegmatis str. MC2 155, complete genomeputative monooxygenase1e-0861.2
NC_015136:1301576:1327918132791813292851368Burkholderia sp. CCGE1001 chromosome 1, complete sequenceNitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A1e-0860.8
NC_010623:72500:9807698076994161341Burkholderia phymatum STM815 chromosome 2, complete sequencexenobiotic compound monooxygenase, DszA family, A subunit2e-0860.5
NC_011894:2747491:2747491274749127488371347Methylobacterium nodulans ORS 2060, complete genomenitrilotriacetate monooxygenase component A (NtA monooxygenase component A) (NtA-MO A)2e-0860.1
NC_016631:4113794:4133907413390741349171011Granulicella mallensis MP5ACTX8 chromosome, complete genomeLuciferase-like, subgroup3e-0860.1
NC_008595:2687245:269683926968392697759921Mycobacterium avium 104, complete genomehypothetical protein4e-0859.3
NC_008726:6393489:6425936642593664272671332Mycobacterium vanbaalenii PYR-1, complete genomeputative xenobiotic compound monooxygenase, DszA family, A subunit5e-0859.3
NC_021177:7815791:783722278372227838139918Streptomyces fulvissimus DSM 40593, complete genomeHydride transferase 11e-0758.2
NC_013131:8480384:852485585248558525784930Catenulispora acidiphila DSM 44928, complete genomeLuciferase-like monooxygenase1e-0757.8
NC_015660:3467579:3491761349176134931221362Geobacillus thermoglucosidasius C56-YS93 chromosome, completenitrilotriacetate monooxygenase family FMN-dependent oxidoreductase2e-0757.4
NC_013407:146000:162714162714163709996Methanocaldococcus vulcanius M7, complete genome5,10-methylenetetrahydromethanopterin reductase3e-0756.6
NC_015563:4024450:4049354404935440506761323Delftia sp. Cs1-4 chromosome, complete genomenitrilotriacetate monooxygenase family FMN-dependent oxidoreductase6e-0755.5
NC_016641:438500:4489694489694500991131Paenibacillus terrae HPL-003 chromosome, complete genomeNtaA/SnaA/SoxA/DszA family monooxygenase7e-0755.5
NC_015562:1299648:130121013012101302205996Methanotorris igneus Kol 5 chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase9e-0755.1
NC_013093:125363:128739128739129671933Actinosynnema mirum DSM 43827, complete genomeLuciferase-like monooxygenase1e-0654.7
NC_009921:593665:601149601149602132984Frankia sp. EAN1pec, complete genomeluciferase family protein1e-0654.7
NC_009921:5508000:551469555146955515615921Frankia sp. EAN1pec, complete genomeluciferase family protein1e-0654.7
NC_010510:339879:3669363669363683451410Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative monooxygenase1e-0654.7
NC_009921:3854969:3859595385959538606471053Frankia sp. EAN1pec, complete genomeluciferase family protein2e-0654.3
NC_016948:2931285:296521529652152966105891Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein1e-0654.3
NC_013526:955848:977624977624978514891Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeLuciferase-like monooxygenase3e-0653.5
NC_012522:7837071:784362278436227844551930Rhodococcus opacus B4, complete genomeputative oxidoreductase3e-0653.1
NC_008268:7052202:705220270522027053074873Rhodococcus sp. RHA1, complete genomepossible hydride transferase4e-0652.8
NC_015580:3252534:3275102327510232764241323Novosphingobium sp. PP1Y, complete genomecoenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein4e-0652.8
NC_008146:4019711:4036459403645940377691311Mycobacterium sp. MCS, complete genomeluciferase-like protein6e-0652
NC_008705:4053070:4070941407094140722511311Mycobacterium sp. KMS, complete genomeluciferase family protein6e-0652
NC_014122:143446:148423148423149418996Methanocaldococcus infernus ME chromosome, complete genome5,10-methylenetetrahydromethanopterin reductase7e-0652
NC_010612:835648:8378668378668391971332Mycobacterium marinum M, complete genomeFMNH2-utilizing oxygenase8e-0652