Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:3104000:3127308 Pseudomonas mendocina ymp, complete genome

Start: 3127308, End: 3128030, Length: 723

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:4253961:427541442754144276109696Pseudomonas putida S16 chromosome, complete genomeflagellar basal body L-ring protein1e-85315
NC_009092:1504363:155948115594811560185705Shewanella loihica PV-4, complete genomeflagellar L-ring protein9e-44176
NC_009997:3661083:366218636621863662860675Shewanella baltica OS195, complete genomeflagellar L-ring protein2e-43175
NC_015424:2917817:292204729220472922721675Aeromonas veronii B565 chromosome, complete genomeflagellar L-ring protein9e-40163
NC_009831:66518:747397473975401663Shewanella sediminis HAW-EB3, complete genomeflagellar L-ring protein2e-39162
NC_010515:1678487:168122316812231681888666Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar L-ring protein5e-34144
NC_015850:1497998:150083615008361501573738Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar L-ring protein FlgH8e-28124
NC_020911:2921925:298362829836282984269642Octadecabacter antarcticus 307, complete genomeflagellar basal-body L-ring protein FlgH1e-25117
NC_013892:1890500:189053318905331891285753Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar basal-body outer-membrane L (lipopolysaccharide layer) ring protein5e-23107
NC_008011:924392:926204926204926896693Lawsonia intracellularis PHE/MN1-00, complete genomeFlagellar basal body L-ring protein5e-23107
NC_016893:43234:513545135452040687Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar protein of basal-body outer-membrane L ring7e-21100
NC_007759:1356439:137230413723041373020717Syntrophus aciditrophicus SB, complete genomeflagellar L-ring protein2e-2099
NC_012880:1765920:181300218130021813688687Dickeya dadantii Ech703, complete genomeflagellar L-ring protein4e-2098.2
NC_008209:253663:257075257075257806732Roseobacter denitrificans OCh 114, complete genomeflagellar L-ring protein FlgH, putative1e-1583.6
NC_004344:26828:502055020550891687Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein4e-1581.6
NC_012440:659646:683725683725684180456Persephonella marina EX-H1, complete genomeflagellar L-ring protein FlgH5e-1581.3
NC_015186:2129046:214073021407302141491762Acidiphilium multivorum AIU301, complete genomeflagellar L-ring protein2e-1376.3
NC_007645:4195500:423356342335634234141579Hahella chejuensis KCTC 2396, complete genomeFlagellar basal body L-ring protein4e-1272
NC_015437:2164997:216616421661642166769606Selenomonas sputigena ATCC 35185 chromosome, complete genomeflagellar L-ring protein4e-1271.6
NC_015379:2999965:302031930203193020897579Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative flagellar L-ring protein 18e-1270.9
NC_010003:335348:352209352209352844636Petrotoga mobilis SJ95, complete genomeflagellar basal body L-ring protein-like protein9e-0650.4