Pre_GI: BLASTP Hits

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Query: NC_009439:3104000:3125965 Pseudomonas mendocina ymp, complete genome

Start: 3125965, End: 3127125, Length: 1161

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:4253961:4274292427429242754071116Pseudomonas putida S16 chromosome, complete genomeflagellar basal body P-ring protein2e-168592
NC_015276:3669263:3691433369143336925331101Marinomonas mediterranea MMB-1 chromosome, complete genomeFlagellar P-ring protein5e-125447
NC_009997:3661083:3661083366108336621741092Shewanella baltica OS195, complete genomeflagellar P-ring protein2e-115416
NC_015424:2917817:2920941292094129220381098Aeromonas veronii B565 chromosome, complete genomeflagellar P-ring protein FlgI2e-112406
NC_009092:1504363:1560197156019715612881092Shewanella loihica PV-4, complete genomeflagellar P-ring protein5e-112404
NC_015850:1497998:1501588150158815027331146Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar P-ring protein flgI3e-99362
NC_020911:2921925:2982492298249229836191128Octadecabacter antarcticus 307, complete genomeflagellar basal-body P-ring protein FlgI3e-96352
NC_009831:66518:7351773517746441128Shewanella sediminis HAW-EB3, complete genomeflagellar P-ring protein2e-94346
NC_010515:1678487:1681948168194816830721125Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar P-ring protein9e-89327
NC_013892:1890500:1891301189130118924191119Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagella basal body protein6e-84311
NC_004344:26828:5090150901520131113Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,flagellar P-ring protein precursor1e-79296
NC_008011:924392:9269429269429280811140Lawsonia intracellularis PHE/MN1-00, complete genomeFlagellar basal-body P-ring protein1e-77290
NC_016893:43234:5205052050531621113Wigglesworthia glossinidia endosymbiont of Glossina morsitansputative flagellar basal body protein4e-76285
NC_012880:1765920:1813699181369918148081110Dickeya dadantii Ech703, complete genomeflagellar P-ring protein1e-75283
NC_007517:480303:4803034803034814001098Geobacter metallireducens GS-15, complete genomeflagellar P-ring protein precursor2e-75283
NC_007759:1356439:1373045137304513742561212Syntrophus aciditrophicus SB, complete genomeflagellar basal-body P-ring protein1e-71270
NC_009952:3522370:3548430354843035495331104Dinoroseobacter shibae DFL 12, complete genomeflagellar P-ring protein FlgI1e-66254
NC_007645:4195500:4232442423244242335661125Hahella chejuensis KCTC 2396, complete genomeFlagellar basal-body P-ring protein1e-65250
NC_010125:1651687:1673621167362116747931173Gluconacetobacter diazotrophicus PAl 5, complete genomeputative flagellar P-ring protein precursor (Basal body P-ring protein)6e-64244
NC_015437:2164997:2164997216499721661091113Selenomonas sputigena ATCC 35185 chromosome, complete genomeflagellar P-ring protein4e-61235
NC_012440:659646:6826276826276837151089Persephonella marina EX-H1, complete genomeflagellar P-ring protein FlgI4e-61235
NC_014032:3330596:3350809335080933519721164Salinibacter ruber M8 chromosome, complete genomeflagellar P-ring protein3e-58226
NC_015379:2999965:3020879302087930220031125Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative flagellar P-ring protein precuror2e-57223
NC_010003:335348:351210351210352196987Petrotoga mobilis SJ95, complete genomeflagellar P-ring protein2e-48193
NC_017080:166180:1661801661801673041125Phycisphaera mikurensis NBRC 102666, complete genomeflagellar P-ring protein7e-0962