Pre_GI: BLASTP Hits

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Query: NC_009439:3104000:3120954 Pseudomonas mendocina ymp, complete genome

Start: 3120954, End: 3122642, Length: 1689

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:4253961:4269492426949242710571566Pseudomonas putida S16 chromosome, complete genomeflagellar hook-associated protein FlgL8e-97354
NC_009348:381752:381752381752382651900Aeromonas salmonicida subsp. salmonicida A449, complete genomelateral flagellar hook-associated protein, LfgL3e-28127
NC_007974:138176:1401271401271413651239Ralstonia metallidurans CH34 chromosome 2, complete sequenceflagellin-like protein5e-28126
NC_015723:280368:2849052849052861341230Cupriavidus necator N-1 chromosome 2, complete sequenceflagellar hook-associated protein 31e-26121
NC_009831:66518:707107071071627918Shewanella sediminis HAW-EB3, complete genomeflagellar hook-associated protein 32e-26120
NC_009092:1504363:1564354156435415655441191Shewanella loihica PV-4, complete genomeflagellar hook-associated protein 37e-24112
NC_015276:3669263:3687069368706936882831215Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar hook-associated protein 32e-21104
NC_007644:779376:783381783381784298918Moorella thermoacetica ATCC 39073, complete genomeFlagellin-like5e-21103
NC_012880:1765920:181760618176061818544939Dickeya dadantii Ech703, complete genomeflagellar hook-associated protein 32e-20101
NC_015850:1497998:1506162150616215074631302Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar hook-associated protein flgL5e-2099.8
NC_009617:4946000:495102849510284952011984Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar hook-associated protein 31e-1998.2
NC_014915:3259440:328194332819433282836894Geobacillus sp. Y412MC52 chromosome, complete genomeflagellar hook-associated protein 35e-1996.3
NC_020291:4944835:4988864498886449900571194Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar hook-associated protein 36e-1995.9
NC_010718:2337209:237219523721952373181987Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar hook-associated protein 38e-1995.5
NC_010674:828191:8281918281918293991209Clostridium botulinum B str. Eklund 17B, complete genomeflagellar hook-associated protein 32e-1894.4
NC_010723:801215:8053698053698065771209Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar hook-associated protein 33e-1894
NC_017195:3426000:343625734362573437153897Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar hook-associated protein 38e-1892.4
NC_006510:3133965:315619931561993157092894Geobacillus kaustophilus HTA426, complete genomeflagellar hook-associated protein7e-1892.4
NC_019896:577594:586765586765587661897Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlagellar hook-associated protein9e-1892
NC_008593:1060548:108462510846251085602978Clostridium novyi NT, complete genomeflagellar hook-associated protein 3, putative9e-1892
NC_015660:391627:391627391627392541915Geobacillus thermoglucosidasius C56-YS93 chromosome, completeflagellar hook-associated protein 31e-1792
NC_015425:1207314:1215947121594712173711425Clostridium botulinum BKT015925 chromosome, complete genomeputative flagellar hook-associated protein 32e-1791.3
NC_014650:376070:376070376070376966897Geobacillus sp. Y4.1MC1 chromosome, complete genomeflagellar hook-associated protein 34e-1790.1
NC_014652:1091610:109161010916101092557948Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar hook-associated protein 37e-1789.4
NC_011567:2556915:255819625581962559068873Anoxybacillus flavithermus WK1, complete genomeFlagellar hook-associated protein1e-1688.2
NC_020134:2772500:277782127778212778732912Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar hook-associated protein 31e-1688.2
NC_017295:2286911:2301355230135523026321278Clostridium acetobutylicum EA 2018 chromosome, complete genomeFlagellin2e-1688.2
NC_009454:2201987:221826022182602219162903Pelotomaculum thermopropionicum SI, complete genomeflagellar hook-associated protein FlgL2e-1687.8
NC_009012:2661795:266906026690602669968909Clostridium thermocellum ATCC 27405, complete genomeflagellar hook-associated protein 32e-1687.4
NC_004193:2553630:256289125628912563772882Oceanobacillus iheyensis HTE831, complete genomeflagellar hook-associated protein5e-1686.3
NC_013892:1890500:189517418951741896136963Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar hook-filament junction protein2e-1584.7
NC_013223:724394:724394724394725272879Desulfohalobium retbaense DSM 5692, complete genomeflagellar hook-associated protein 32e-1481.3
NC_004557:1826977:183441918344191835369951Clostridium tetani E88, complete genomeflagellar hook-associated protein 33e-1480.9
NC_014831:218696:220519220519221406888Thermaerobacter marianensis DSM 12885 chromosome, complete genomeflagellar hook-associated protein 33e-1480.5
NC_011899:1807365:182964518296451830550906Halothermothrix orenii H 168, complete genomeflagellar hook-associated protein 36e-1479.7
NC_014032:3330596:334731233473123348274963Salinibacter ruber M8 chromosome, complete genomeflagellar hook-associated protein FlgL7e-1479.3
NC_019978:2260395:2275519227551922767031185Halobacteroides halobius DSM 5150, complete genomeflagellar hook-associated protein 36e-1479.3
NC_007503:861668:861668861668862531864Carboxydothermus hydrogenoformans Z-2901, complete genomeflagellar hook-associated protein 31e-1378.6
NC_012793:3035978:304447430444743045379906Geobacillus sp. WCH70, complete genomeflagellar hook-associated protein 32e-1377.8
NC_014098:3030274:305166130516613052551891Bacillus tusciae DSM 2912 chromosome, complete genomeflagellar hook-associated protein 32e-1377.8
NC_014328:1046958:1062801106280110642071407Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar hook-associated protein4e-1377
NC_013522:698114:7011627011627041883027Thermanaerovibrio acidaminovorans DSM 6589, complete genomeflagellin domain protein4e-1377
NC_021182:2921000:2933008293300829340421035Clostridium pasteurianum BC1, complete genomeflagellar hook-associated protein 35e-1376.6
NC_010515:1678487:168530016853001686214915Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar hook-associated protein 35e-1376.6
NC_016584:4363382:4377886437788643792621377Desulfosporosinus orientis DSM 765 chromosome, complete genomeflagellar hook-associated protein 36e-1376.3
NC_015577:2143477:2143477214347721447241248Treponema azotonutricium ZAS-9 chromosome, complete genomeflagellar hook-associated protein 36e-1376.3
NC_020911:2921925:2976534297653429777961263Octadecabacter antarcticus 307, complete genomeFlgL-like flagellar hook associated protein6e-1376.3
NC_009922:2721343:2726589272658927279051317Alkaliphilus oremlandii OhILAs, complete genomeflagellar hook-associated protein 35e-1376.3
NC_018664:239000:2513482513482528411494Clostridium acidurici 9a chromosome, complete genomeflagellar hook-associated protein 38e-1375.9
NC_010337:748467:771320771320772249930Heliobacterium modesticaldum Ice1, complete genomeflagellar hook-associated protein 3, putative8e-1375.9
NC_014829:3877701:3883031388303138842151185Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeflagellar hook-associated protein 32e-1274.7
NC_015172:1075592:1085304108530410866801377Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeflagellar hook-associated protein 32e-1274.3
NC_015589:1240197:1245694124569412467221029Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeflagellar hook-associated protein 32e-1171.2
NC_016935:75186:102835102835103731897Paenibacillus mucilaginosus 3016 chromosome, complete genomeflagellar hook-associated protein 33e-1170.5
NC_009633:760872:775190775190776146957Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar hook-associated protein 35e-1170.1
NC_013791:1082951:1101117110111711028381722Bacillus pseudofirmus OF4 chromosome, complete genomeflagellar hook-associated protein 3 (HAP3)9e-1168.9
NC_009664:570768:585496585496586404909Kineococcus radiotolerans SRS30216, complete genomeflagellar hook-associated protein 31e-1068.6
NC_015690:75223:102808102808103698891Paenibacillus mucilaginosus KNP414 chromosome, complete genomeflagellar hook-associated protein 32e-1068.2
NC_008011:924392:9316339316339332101578Lawsonia intracellularis PHE/MN1-00, complete genomeFlagellin and related hook-associated proteins1e-1068.2
NC_016641:945284:953016953016953924909Paenibacillus terrae HPL-003 chromosome, complete genomeflagellin1e-0965.1
NC_012914:6583000:660351866035186604477960Paenibacillus sp. JDR-2, complete genomeflagellar hook-associated protein 31e-0965.1
NC_016011:678419:693187693187694062876Listeria ivanovii subsp. ivanovii PAM 55, complete genomeputative flagellar hook-associated protein 3 FlgL2e-0964.3
NC_013891:640784:648449648449649324876Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeflagellar hook-associated protein FlgL, putative4e-0963.5
NC_019897:128610:176492176492177400909Thermobacillus composti KWC4 chromosome, complete genomeflagellar hook-associated protein 33e-0963.5
NC_007517:480303:484210484210485094885Geobacter metallireducens GS-15, complete genomeFlagellin-like3e-0963.5
NC_013093:2599591:261417626141762615054879Actinosynnema mirum DSM 43827, complete genomeflagellar hook-associated protein 35e-0963.2
NC_015318:290849:3078103078103105122703Hippea maritima DSM 10411 chromosome, complete genomeflagellin domain-containing protein9e-0962.4
NC_007759:1356439:1377134137713413783451212Syntrophus aciditrophicus SB, complete genomeflagellin and related hook-associated proteins1e-0862.4
NC_015391:2059191:209593620959362096835900Carnobacterium sp. 17-4 chromosome, complete genomeflagellar hook-associated protein FlgL2e-0861.6
NC_015913:624859:629998629998630969972Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar hook-associated protein1e-0861.6
NC_016012:561687:569611569611570582972Candidatus Arthromitus sp. SFB-rat-Yit, complete genomeflagellar hook-associated protein 33e-0860.5
NC_012658:2930244:294083729408372941799963Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar hook-associated protein 38e-0859.3
NC_012563:3090954:310335231033523104314963Clostridium botulinum A2 str. Kyoto, complete genomeflagellar hook-associated protein 39e-0858.9
NC_009495:2876865:288926328892632890225963Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar hook-associated protein 39e-0858.9
NC_009697:2790277:280267528026752803637963Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar hook-associated protein 39e-0858.9
NC_009698:2727203:273960127396012740563963Clostridium botulinum A str. Hall chromosome, complete genomeflagellar hook-associated protein 39e-0858.9
NC_010424:1857062:187816918781691879101933Candidatus Desulforudis audaxviator MP104C, complete genomeflagellar hook-associated protein 31e-0758.5
NC_006177:3192500:320079532007953201676882Symbiobacterium thermophilum IAM 14863, complete genomeflagellar-hook associated protein2e-0758.2
NC_010002:661696:6876946876946888931200Delftia acidovorans SPH-1, complete genomeflagellar hook-associated protein 32e-0758.2
NC_021182:2921000:2926754292675429278841131Clostridium pasteurianum BC1, complete genomeflagellin/flagellar hook associated protein2e-0757.8
NC_010001:4703500:4714233471423347157411509Clostridium phytofermentans ISDg, complete genomeflagellin domain protein3e-0757.4
NC_012793:3035978:3048807304880730512062400Geobacillus sp. WCH70, complete genomeflagellin domain protein5e-0756.6
NC_011567:2556915:2562369256236925642251857Anoxybacillus flavithermus WK1, complete genomeFlagellin protein FliA(H)5e-0756.6
NC_010520:2937981:294868329486832949645963Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar hook-associated protein 37e-0756.2
NC_010516:2900057:290832629083262909288963Clostridium botulinum B1 str. Okra, complete genomeflagellar hook-associated protein 37e-0756.2
NC_009699:2901497:291286529128652913827963Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar hook-associated protein 37e-0755.8
NC_017297:2905138:291300329130032913965963Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar hook-associated protein 37e-0755.8
NC_006510:3133965:3160585316058531623991815Geobacillus kaustophilus HTA426, complete genomeflagellar protein3e-0653.9
NC_009922:2672396:2679912267991226815281617Alkaliphilus oremlandii OhILAs, complete genomeflagellin domain protein3e-0653.9
NC_014032:3330596:3343722334372233450891368Salinibacter ruber M8 chromosome, complete genomeflagellin A4e-0653.5
NC_014378:261064:2626372626372640731437Acetohalobium arabaticum DSM 5501 chromosome, complete genomeflagellin domain protein6e-0652.8