Some Help

Query: NC_009439:3104000:3120043 Pseudomonas mendocina ymp, complete genome

Start: 3120043, End: 3120813, Length: 771

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014924:725380:736781736781737533753Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeMethyltransferase type 121e-34146
NC_009438:3019552:303762630376263038366741Shewanella putrefaciens CN-32 chromosome, complete genometype 12 methyltransferase3e-21102
NC_014532:2268078:2295056229505622961351080Halomonas elongata DSM 2581, complete genomepossible transcriptional regulatory protein3e-0755.8
NC_017082:5789534:5812978581297858185545577Bradyrhizobium sp. S23321, complete genomeamino acid adenylation protein7e-0754.7
NC_008942:1706191:172229617222961723159864Methanocorpusculum labreanum Z, complete genomehypothetical protein2e-0652.8