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Query: NC_009439:3104000:3119441 Pseudomonas mendocina ymp, complete genome

Start: 3119441, End: 3120046, Length: 606

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014924:725380:737530737530738132603Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IB (PSPase-like)3e-43174
NC_009438:3019552:303701730370173037616600Shewanella putrefaciens CN-32 chromosome, complete genomeHAD family hydrolase4e-43174
NC_011883:1182000:119076011907601191374615Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,HAD-superfamily hydrolase, subfamily IB (PSPase-like)3e-24111
NC_013922:1911338:191462419146241915262639Natrialba magadii ATCC 43099 chromosome, complete genomephosphoserine phosphatase SerB6e-0753.9
NC_015563:4414854:441911144191114419824714Delftia sp. Cs1-4 chromosome, complete genomephosphoserine phosphatase SerB1e-0652.8
NC_015571:1065775:107453310745331075405873Porphyromonas gingivalis TDC60, complete genomeSerB family protein2e-0652.8