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Query: NC_009439:3104000:3111333 Pseudomonas mendocina ymp, complete genome

Start: 3111333, End: 3111725, Length: 393

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:4253961:426364842636484264007360Pseudomonas putida S16 chromosome, complete genomeflagellar protein FlaG protein6e-1682.8
NC_015740:1845370:185136018513601851680321Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeflagellin FlaG2e-1581.3
NC_009434:2006500:201260420126042012948345Pseudomonas stutzeri A1501, complete genomeflagellin FlaG, putative5e-1579.7
NC_002939:3303989:330508833050883305468381Geobacter sulfurreducens PCA, complete genomeflagellin FlaG, putative4e-1373.6
NC_009092:1504363:156761315676131568002390Shewanella loihica PV-4, complete genomeflagellar protein FlaG protein5e-1373.2
NC_015731:990000:100266010026601003031372Nitrosomonas sp. Is79A3 chromosome, complete genomeflagellar protein FlaG protein8e-1372.4
NC_008340:774206:784226784226784657432Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar protein FlaG protein1e-1272
NC_008340:774206:783234783234783623390Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar protein FlaG protein5e-1269.7
NC_008740:2905990:291106729110672911501435Marinobacter aquaeolei VT8, complete genomeflagellar protein FlaG protein1e-1168.6
NC_013851:2211120:223536122353612235831471Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar protein FlaG protein2e-1064.7
NC_016745:2913712:292921029292102929587378Oceanimonas sp. GK1 chromosome, complete genomeflagellin FlaG3e-1063.5
NC_016616:1861852:187257918725791872980402Dechlorosoma suillum PS chromosome, complete genomeflagellar protein FlaG2e-0858.2
NC_012108:4118888:414777541477754148176402Desulfobacterium autotrophicum HRM2, complete genomeFlaG2e-0857.8
NC_005085:4157257:417917241791724179597426Chromobacterium violaceum ATCC 12472, complete genomeFlagellin protein4e-0856.6
NC_009138:1843998:188711118871111887449339Herminiimonas arsenicoxydans, complete genomehypothetical protein4e-0856.6
NC_009348:2836969:284550828455082845948441Aeromonas salmonicida subsp. salmonicida A449, complete genomeflagellar protein FlaG4e-0753.5
NC_008570:1852286:186142618614261861866441Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeflagellin protein5e-0649.7