Pre_GI: BLASTN Hits

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Query: NC_009092:2902171 Shewanella loihica PV-4, complete genome

Start: 2902171, End: 2930494, Length: 28324

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008260:2021162*2021162204220421043Alcanivorax borkumensis SK2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014541:12808351280835130859927765Ferrimonas balearica DSM 9799 chromosome, complete genome3e-37165BLASTN svgBLASTP svg
NC_014541:12310211231021125347822458Ferrimonas balearica DSM 9799 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_008228:36089093608909362723518327Pseudoalteromonas atlantica T6c, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_004129:4093610*4093610411954425935Pseudomonas fluorescens Pf-5, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_015733:21946762194676221628521610Pseudomonas putida S16 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009052:18999541899954192338923436Shewanella baltica OS155, complete genome0944BLASTN svgBLASTP svg
NC_009831:3092126*3092126311332621201Shewanella sediminis HAW-EB3, complete genome5e-79303BLASTN svgBLASTP svg
NC_008577:31256753125675314666320989Shewanella sp. ANA-3 chromosome 1, complete sequence0979BLASTN svgBLASTP svg
NC_008321:29220002922000294409922100Shewanella sp. MR-4, complete genome01019BLASTN svgBLASTP svg
NC_008322:29839512983951300671222762Shewanella sp. MR-7, complete genome01003BLASTN svgBLASTP svg
NC_014012:33566293356629337459917971Shewanella violacea DSS12, complete genome01074BLASTN svgBLASTP svg