Pre_GI: BLASTN Hits

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Query: NC_009092:1989977 Shewanella loihica PV-4, complete genome

Start: 1989977, End: 2018545, Length: 28569

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008570:2768795*2768795279764928855Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-18101BLASTN svgBLASTP svg
NC_015424:2357600*2357600239563038031Aeromonas veronii B565 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008253:28285732828573285250723935Escherichia coli 536, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009801:30138383013838304465430817Escherichia coli E24377A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014541:11659911165991120221836228Ferrimonas balearica DSM 9799 chromosome, complete genome7e-60240BLASTN svgBLASTP svg
NC_014541:17537761753776178218228407Ferrimonas balearica DSM 9799 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_007954:2440000*2440000246325523256Shewanella denitrificans OS217, complete genome7e-100373BLASTN svgBLASTP svg
NC_007954:13841013841016136622957Shewanella denitrificans OS217, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010334:30405893040589306315022562Shewanella halifaxensis HAW-EB4, complete genome1e-42182BLASTN svgBLASTP svg
NC_010334:27492502749250277313323884Shewanella halifaxensis HAW-EB4, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_009092:26441642644164266929125128Shewanella loihica PV-4, complete genome01306BLASTN svgBLASTP svg
NC_009901:24272912427291245245225162Shewanella pealeana ATCC 700345, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009831:3092126*3092126311332621201Shewanella sediminis HAW-EB3, complete genome1e-42182BLASTN svgBLASTP svg