Query: NC_009092:1935281 Shewanella loihica PV-4, complete genome
Start: 1935281, End: 1959285, Length: 24005
Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009092:3239500 | 3239500 | 3261290 | 21791 | Shewanella loihica PV-4, complete genome | 2e-152 | 547 | BLASTN svg | BLASTP svg |
NC_009092:3057319* | 3057319 | 3084097 | 26779 | Shewanella loihica PV-4, complete genome | 6e-60 | 240 | BLASTN svg | BLASTP svg |
NC_009092:1504363 | 1504363 | 1580103 | 75741 | Shewanella loihica PV-4, complete genome | 3e-58 | 234 | BLASTN svg | BLASTP svg |
NC_009092:3732390 | 3732390 | 3755532 | 23143 | Shewanella loihica PV-4, complete genome | 1e-51 | 212 | BLASTN svg | BLASTP svg |
NC_009092:1047500* | 1047500 | 1072729 | 25230 | Shewanella loihica PV-4, complete genome | 5e-51 | 210 | BLASTN svg | BLASTP svg |
NC_008321:3232000 | 3232000 | 3254099 | 22100 | Shewanella sp. MR-4, complete genome | 7e-44 | 186 | BLASTN svg | BLASTP svg |
NC_008321:2190000 | 2190000 | 2210070 | 20071 | Shewanella sp. MR-4, complete genome | 3e-34 | 155 | BLASTN svg | BLASTP svg |
NC_009092:3783000 | 3783000 | 3802099 | 19100 | Shewanella loihica PV-4, complete genome | 6e-26 | 127 | BLASTN svg | BLASTP svg |
NC_009092:2644164 | 2644164 | 2669291 | 25128 | Shewanella loihica PV-4, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_018868:3036205* | 3036205 | 3075475 | 39271 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_008577:2910383* | 2910383 | 2929291 | 18909 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_008577:4611431 | 4611431 | 4640873 | 29443 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_009997:2635025 | 2635025 | 2666893 | 31869 | Shewanella baltica OS195, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_018678:2140182 | 2140182 | 2163223 | 23042 | Alteromonas macleodii str. 'English Channel 673' chromosome, | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009092:1305355 | 1305355 | 1328936 | 23582 | Shewanella loihica PV-4, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_008577:2604281 | 2604281 | 2642006 | 37726 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009092:2529518 | 2529518 | 2552506 | 22989 | Shewanella loihica PV-4, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008577:2511326 | 2511326 | 2530764 | 19439 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_018868:3229381 | 3229381 | 3254578 | 25198 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009138:467268 | 467268 | 514353 | 47086 | Herminiimonas arsenicoxydans, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014500:4883794 | 4883794 | 4903284 | 19491 | Dickeya dadantii 3937 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_012912:4737703 | 4737703 | 4760711 | 23009 | Dickeya zeae Ech1591, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009092:261778 | 261778 | 284599 | 22822 | Shewanella loihica PV-4, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009348:4011160 | 4011160 | 4031611 | 20452 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008570:546736 | 546736 | 567381 | 20646 | Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |