Pre_GI: BLASTN Hits

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Query: NC_009092:1684467 Shewanella loihica PV-4, complete genome

Start: 1684467, End: 1703086, Length: 18620

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015554:12154011215401123622120821Alteromonas sp. SN2 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_012881:3520956*3520956354109920144Desulfovibrio salexigens DSM 2638, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012881:2310141*2310141233309622956Desulfovibrio salexigens DSM 2638, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012880:3421500*3421500345764636147Dickeya dadantii Ech703, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012912:2800884*2800884281980818925Dickeya zeae Ech1591, complete genome4e-20107BLASTN svgBLASTP svg
NC_009778:95998295998298509925118Enterobacter sakazakii ATCC BAA-894, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013961:2370994*2370994240176230769Erwinia amylovora, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_006512:728281*72828175150523225Idiomarina loihiensis L2TR, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome9e-0660BLASTN svgBLASTP svg
NC_007626:3996000*3996000401964723648Magnetospirillum magneticum AMB-1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010120:609323*60932363703227710Neisseria meningitidis 053442, complete genome9e-0660BLASTN svgBLASTP svg
NC_008767:613394*61339463989326500Neisseria meningitidis FAM18, complete genome9e-0660BLASTN svgBLASTP svg
NC_003112:673772*67377269516421393Neisseria meningitidis MC58, complete genome9e-0660BLASTN svgBLASTP svg
NC_015222:2089767*2089767212261832852Nitrosomonas sp. AL212 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015731:867377*86737792057653200Nitrosomonas sp. Is79A3 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014837:1570500*1570500160135230853Pantoea sp. At-9b chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012917:1840172*1840172189159251421Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008781:2981868*2981868300465822791Polaromonas naphthalenivorans CJ2, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008228:2295841*2295841231867322833Pseudoalteromonas atlantica T6c, complete genome3e-18101BLASTN svgBLASTP svg
NC_007908:1328832*1328832136532136490Rhodoferax ferrireducens T118, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010067:660659*66065968851527857Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-1799.6BLASTN svgBLASTP svg
NC_011149:22945002294500231681122312Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-1797.6BLASTN svgBLASTP svg
NC_011083:23750612375061241289137831Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-1797.6BLASTN svgBLASTP svg
NC_010102:683444*68344472210838665Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-1797.6BLASTN svgBLASTP svg
NC_004631:685357*68535771085325497Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-1797.6BLASTN svgBLASTP svg
NC_003197:23274742327474236419536722Salmonella typhimurium LT2, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_020064:3157656*3157656318828830633Serratia marcescens FGI94, complete genome3e-24121BLASTN svgBLASTP svg
NC_015566:3622385*3622385364177919395Serratia sp. AS12 chromosome, complete genome6e-19103BLASTN svgBLASTP svg
NC_015566:3659318*3659318367796918652Serratia sp. AS12 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_008577:2910383*2910383292929118909Shewanella sp. ANA-3 chromosome 1, complete sequence3e-36161BLASTN svgBLASTP svg
NC_008321:26497812649781268071830938Shewanella sp. MR-4, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008322:27166762716676274827431599Shewanella sp. MR-7, complete genome6e-44186BLASTN svgBLASTP svg
NC_018868:1352000*1352000138222930230Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg