Pre_GI: BLASTP Hits

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Query: NC_009012:1901492:1910020 Clostridium thermocellum ATCC 27405, complete genome

Start: 1910020, End: 1911138, Length: 1119

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:1960097:1968797196879719699151119Clostridium clariflavum DSM 19732 chromosome, complete genomeABC transporter permease3e-174611
NC_014614:1259236:1272508127250812735721065Clostridium sticklandii, complete genomeABC transporter, permease1e-66254
NC_009617:3647500:3652264365226436533911128Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator1e-56220
NC_009617:4761000:4767914476791447690411128Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator2e-55216
NC_013171:312500:3317783317783329441167Anaerococcus prevotii DSM 20548, complete genomeinner-membrane translocator3e-54213
NC_008262:1721496:1737591173759117386881098Clostridium perfringens SM101, complete genomeABC transporter (permease proteins)-like protein lmo13901e-50200
NC_008593:555463:5614955614955625711077Clostridium novyi NT, complete genomeBranched-chain amino acid transport system / permease component superfamily, putative8e-48191
NC_008710:703740:7200767200767212271152Borrelia turicatae 91E135, complete genomenucleoside transport system permease protein1e-46187
NC_010673:703816:7226587226587238091152Borrelia hermsii DAH, complete genomenucleoside transport system permease protein4e-46185
NC_015425:604842:6120066120066130821077Clostridium botulinum BKT015925 chromosome, complete genomesugar ABC transporter permease6e-45181
NC_013517:1249466:1253897125389712549611065Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator2e-44180
NC_013517:1916020:1923299192329919243631065Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator2e-44180
NC_012472:3625800:3645222364522236462801059Bacillus cereus 03BB102, complete genomesugar ABC transporter, permease protein5e-42172
NC_008600:3611038:3627215362721536282731059Bacillus thuringiensis str. Al Hakam, complete genomeABC transporter, permease5e-42172
NC_017200:3622838:3642152364215236432101059Bacillus thuringiensis serovar finitimus YBT-020 chromosome,sugar ABC transporter permease8e-41167
NC_019970:2263427:2280233228023322812881056Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type uncharacterized transport system, permease component2e-40166
NC_011661:1175743:1174647117464711757501104Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator2e-39163
NC_015555:1989463:2008288200828820093431056Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, integral membrane subunit3e-39162
NC_014614:432000:4392694392694403301062Clostridium sticklandii, complete genomeYufP3e-37155
NC_014330:1957725:1976699197669919778201122Brachyspira pilosicoli 95/1000 chromosome, complete genomeinner-membrane translocator2e-36153
NC_013169:805124:8038448038448051271284Kytococcus sedentarius DSM 20547, complete genomenucleoside ABC transporter membrane protein3e-36152
NC_013205:19295:4301743017440901074Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,inner-membrane translocator5e-36152
NC_012225:1775264:1792295179229517934101116Brachyspira hyodysenteriae WA1, complete genomeinner-membrane-translocator5e-36152
NC_017243:314000:3156913156913168061116Brachyspira intermedia PWS/A chromosome, complete genomeinner-membrane-translocator6e-36151
NC_015500:78223:7973679736807791044Treponema brennaborense DSM 12168 chromosome, complete genomeABC-type transporter, integral membrane subunit5e-35149
NC_014150:1123570:1128252112825211293671116Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator1e-34147
NC_015152:2622000:2635976263597626370881113Spirochaeta sp. Buddy chromosome, complete genomeABC transporter inner membrane protein2e-34147
NC_010723:2873886:2879822287982228809761155Clostridium botulinum E3 str. Alaska E43, complete genomeABC transporter, permease protein5e-34145
NC_010674:3049500:3056417305641730575711155Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, permease protein6e-34145
NC_020291:5093138:5103323510332351045431221Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomenucleoside ABC transporter membrane protein8e-34144
NC_020291:1810527:1821906182190618231261221Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesugar ABC transporter, permease protein4e-33142
NC_014364:111000:1256021256021267171116Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeinner-membrane translocator2e-31137
NC_013517:825100:8265988265988276861089Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator4e-31135
NC_015474:252390:2707762707762717771002Pyrococcus sp. NA2 chromosome, complete genomeribose ABC transporter, permease protein5e-30132
NC_013517:3846747:3852715385271538537461032Sebaldella termitidis ATCC 33386, complete genomeinner-membrane translocator9e-30131
NC_008054:1815723:1834159183415918352981140Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeABC transporter, permease protein1e-29130
NC_009376:1442314:1442314144231414433181005Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeinner-membrane translocator2e-28127
NC_007802:1240989:1260529126052912615721044Jannaschia sp. CCS1, complete genomeinner-membrane translocator3e-28126
NC_000868:416958:437044437044438033990Pyrococcus abyssi GE5, complete genomeribose ABC transporter, permease protein1e-27124
NC_013192:664408:6700456700456711121068Leptotrichia buccalis DSM 1135, complete genomeinner-membrane translocator1e-26120
NC_016751:1524848:1536238153623815373921155Marinitoga piezophila KA3 chromosome, complete genomeABC transporter permease2e-24114
NC_000961:1481685:1503359150335915043721014Pyrococcus horikoshii OT3, complete genomehypothetical protein3e-24112
NC_010723:3499291:3509005350900535100661062Clostridium botulinum E3 str. Alaska E43, complete genomesugar ABC transporter, permease protein4e-24112
NC_014150:2399997:2405465240546524065261062Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator2e-23110
NC_016633:14000:1823718237192591023Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeABC transporter permease2e-23110
NC_017079:261736:2973132973132984311119Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeABC transporter permease3e-23109
NC_015315:1458803:1460898146089814619051008Thermoproteus uzoniensis 768-20 chromosome, complete genomeinner-membrane translocator4e-23109
NC_008212:1685367:1694022169402216951131092Haloquadratum walsbyi DSM 16790, complete genomeABC-type ribose transport system, permease protein6e-23108
NC_014363:1396912:1420413142041314215311119Olsenella uli DSM 7084 chromosome, complete genomenucleoside ABC transporter membrane protein2e-22107
NC_001263:243000:2454862454862474982013Deinococcus radiodurans R1 chromosome 1, complete sequencehypothetical protein3e-22106
NC_015856:268034:2696852696852707911107Collimonas fungivorans Ter331 chromosome, complete genomeputative transmembrane ABC transporter protein2e-21103
NC_008570:236500:2374942374942386091116Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeputative transport system permease abc transporter protein8e-2098.2
NC_014328:3294086:3306387330638733074751089Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative ABC transporter permease1e-1894
NC_014168:994640:9972819972819983541074Segniliparus rotundus DSM 44985 chromosome, complete genomeinner-membrane translocator2e-1790.1
NC_014364:815346:8762108762108772531044Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeinner-membrane translocator3e-1789.7
NC_013967:1878045:1878045187804518791751131Haloferax volcanii DS2 chromosome, complete genomeABC-type transport system permease protein (probable substrate sugar)4e-1789.4
NC_011985:1831961:1853200185320018542941095Agrobacterium radiobacter K84 chromosome 1, complete genomesugar ABC transporter3e-1686.3
NC_010725:4618000:4631792463179246329341143Methylobacterium populi BJ001, complete genomeinner-membrane translocator9e-1684.7
NC_017075:4880807:4880807488080748819071101Rubrivivax gelatinosus IL144, complete genomeputative ABC transporter permease9e-1684.7
NC_014614:1259236:127357712735771274509933Clostridium sticklandii, complete genomeNucleoside transport system permease protein2e-1583.6
NC_012785:1960500:1963226196322619642631038Kosmotoga olearia TBF 19.5.1, complete genomeinner-membrane translocator7e-1582
NC_008593:555463:562564562564563481918Clostridium novyi NT, complete genomeABC transporter, permease protein2e-1480.1
NC_021182:380500:3989253989253999981074Clostridium pasteurianum BC1, complete genomeABC-type uncharacterized transport system, permease component1e-1378.2
NC_015425:604842:613075613075613992918Clostridium botulinum BKT015925 chromosome, complete genomesugar ABC transporter permease3e-1376.6
NC_009617:3647500:365139036513903652274885Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator2e-1273.6
NC_017075:4880807:4902094490209449031521059Rubrivivax gelatinosus IL144, complete genomeputative ABC transporter permease7e-1272
NC_017200:3622838:364119236411923642151960Bacillus thuringiensis serovar finitimus YBT-020 chromosome,sugar ABC transporter permease9e-1271.6
NC_012472:3625800:364426236442623645221960Bacillus cereus 03BB102, complete genomesugar ABC transporter, permease protein1e-1170.9
NC_008600:3611038:362625536262553627214960Bacillus thuringiensis str. Al Hakam, complete genomeABC transporter, permease1e-1170.9
NC_009617:4761000:476704047670404767924885Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeinner-membrane translocator1e-1171.2
NC_012796:345000:3638323638323648751044Desulfovibrio magneticus RS-1, complete genomeABC transporter permease protein7e-1168.6
NC_011772:3705878:372787737278773728836960Bacillus cereus G9842, complete genomesugar ABC transporter, permease protein9e-1168.2
NC_014150:1123570:112726111272611128214954Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator1e-1067.4
NC_016627:1960097:196786219678621968797936Clostridium clariflavum DSM 19732 chromosome, complete genomeABC transporter permease3e-1066.6
NC_009012:1901492:191113919111391912074936Clostridium thermocellum ATCC 27405, complete genomeinner-membrane translocator3e-1066.6
NC_014961:335808:3533703533703544911122Desulfurococcus mucosus DSM 2162 chromosome, complete genomenucleoside ABC transporter membrane protein5e-1065.5
NC_017243:314000:314706314706315659954Brachyspira intermedia PWS/A chromosome, complete genomeinner membrane translocator1e-0964.7
NC_010674:3049500:305546230554623056415954Clostridium botulinum B str. Eklund 17B, complete genomeABC transporter, permease protein3e-0963.2
NC_012225:1775264:179344217934421794395954Brachyspira hyodysenteriae WA1, complete genomeinner membrane translocator3e-0963.2
NC_008262:1721496:173663817366381737591954Clostridium perfringens SM101, complete genomesugar ABC transporter3e-0963.2
NC_010723:2873886:287886728788672879820954Clostridium botulinum E3 str. Alaska E43, complete genomeABC transporter, permease protein4e-0962.8
NC_010001:986500:9901339901339912331101Clostridium phytofermentans ISDg, complete genomeinner-membrane translocator5e-0962.4
NC_013192:664408:671159671159672028870Leptotrichia buccalis DSM 1135, complete genomeinner-membrane translocator5e-0962.4
NC_015500:78223:807898078981736948Treponema brennaborense DSM 12168 chromosome, complete genomeABC-type transporter, integral membrane subunit6e-0962.4
NC_009033:133800:1353691353691364451077Staphylothermus marinus F1, complete genomeinner-membrane translocator8e-0961.6
NC_011661:1175743:117574311757431176669927Dictyoglomus turgidum DSM 6724, complete genomeinner-membrane translocator1e-0861.2
NC_006055:769418:7733867733867752241839Mesoplasma florum L1, complete genomeribose ABC transporter permease component1e-0861.6
NC_008054:1815723:183529818352981836254957Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeABC transporter, permease protein7e-0858.5
NC_014364:111000:126707126707127633927Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeinner-membrane translocator3e-0756.6
NC_019970:2263427:227931322793132280236924Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeputative ABC-type transport system, permease component3e-0756.2
NC_015555:1989463:200736820073682008291924Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeABC-type transporter, integral membrane subunit5e-0755.8
NC_008212:1685367:1695106169510616962271122Haloquadratum walsbyi DSM 16790, complete genomeABC-type ribose transport system, permease protein5e-0755.8
NC_015152:2622000:263502126350212635983963Spirochaeta sp. Buddy chromosome, complete genomeABC transporter inner membrane protein3e-0653.1
NC_012785:1960500:196234819623481963229882Kosmotoga olearia TBF 19.5.1, complete genomeinner-membrane translocator3e-0653.1
NC_014150:2399997:240654924065492407487939Brachyspira murdochii DSM 12563 chromosome, complete genomeinner-membrane translocator3e-0653.1
NC_007802:1240989:125959112595911260532942Jannaschia sp. CCS1, complete genomeinner-membrane translocator3e-0653.5
NC_020291:5093138:510236551023655103321957Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomenucleoside ABC transporter membrane protein5e-0652.4
NC_020291:1810527:182312818231281824084957Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomesugar ABC transporter, permease protein5e-0652.4
NC_010001:986500:991233991233992192960Clostridium phytofermentans ISDg, complete genomeinner-membrane translocator6e-0652.4