Pre_GI: BLASTN Hits

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Query: NC_008800:3123495 Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,

Start: 3123495, End: 3142099, Length: 18605

Host Lineage: Yersinia enterocolitica; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This isolate (strain 8081; NCTC 13174) is a mouse-lethal serotype of Yersinia enterocolitica that contains a high pathogenicity island (HPI) that encodes an iron uptake system (yersiniabactin) and a type II secretion system. Causes gastroenteritis. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This species is a food and waterborn pathogen that causes gastroenteritis (inflammation of the mucous membranes of the stomach and intestine) and is able to proliferate at temperatures as low as 4 degrees C.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009348:2034500*2034500205759923100Aeromonas salmonicida subsp. salmonicida A449, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014910:15019521501952152412822177Alicycliphilus denitrificans BC chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012751:275336*27533629828722952Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete4e-1177.8BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome4e-48200BLASTN svgBLASTP svg
NC_013446:1724000*1724000175930835309Comamonas testosteroni CNB-2, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012912:2800884*2800884281980818925Dickeya zeae Ech1591, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_004431:35131473513147354268029534Escherichia coli CFT073, complete genome8e-77295BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome3e-76293BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome3e-76293BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome3e-76293BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome3e-76293BLASTN svgBLASTP svg
NC_014541:27366412736641275872122081Ferrimonas balearica DSM 9799 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014394:2765261*2765261278592820668Gallionella capsiferriformans ES-2 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_002946:618439*61843964067022232Neisseria gonorrhoeae FA 1090, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008767:1321129*1321129134743826310Neisseria meningitidis FAM18, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003116:1518110*1518110154147823369Neisseria meningitidis Z2491, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014840:20572320572326669960977Pantoea sp. At-9b plasmid pPAT9B03, complete sequence4e-1487.7BLASTN svgBLASTP svg
NC_020209:4312892*4312892435777044879Pseudomonas poae RE*1-1-14, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015061:31112113111211313800526795Rahnella sp. Y9602 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010067:1300606*1300606132180421199Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete9e-0660BLASTN svgBLASTP svg
NC_020064:1409596*1409596145680247207Serratia marcescens FGI94, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008322:37585003758500378050122002Shewanella sp. MR-7, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010658:36226103622610364133018721Shigella boydii CDC 3083-94, complete genome2e-65258BLASTN svgBLASTP svg
NC_007613:41197714119771413859918829Shigella boydii Sb227, complete genome2e-52214BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome3e-79303BLASTN svgBLASTP svg
NC_004741:24562972456297247959923303Shigella flexneri 2a str. 2457T, complete genome3e-76293BLASTN svgBLASTP svg
NC_004851:15767515767518009922425Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence9e-0660BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome2e-74287BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome5e-78299BLASTN svgBLASTP svg
NC_004337:24784612478461250482826368Shigella flexneri 2a str. 301, complete genome3e-76293BLASTN svgBLASTP svg
NC_008258:26980626980629518525380Shigella flexneri 5 str. 8401, complete genome5e-72280BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome8e-77295BLASTN svgBLASTP svg
NC_007384:16968311696831171856121731Shigella sonnei Ss046, complete genome8e-77295BLASTN svgBLASTP svg
NC_007384:25878762587876261159923724Shigella sonnei Ss046, complete genome2e-62248BLASTN svgBLASTP svg
NC_014228:1336466*1336466135833321868Xenorhabdus nematophila ATCC 19061, complete genome7e-28133BLASTN svgBLASTP svg
NC_015224:1641819*1641819166509923281Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,016810BLASTN svgBLASTP svg