Query: NC_008710:577696 Borrelia turicatae 91E135, complete genome
Start: 577696, End: 602953, Length: 25258
Host Lineage: Borrelia turicatae; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria
General Information: This strain was isolated in the USA from the soft tick Ornithodoros turicatae. Borrelia turicatae is the causative agent of tick-borne relapsing fever in the southwestern USA. Ticks become infected with Borrelia while feeding on an infected mammal, usually a rodent or squirrel. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the spirochete into a mammalian host through its infectious saliva. Relapsing fever is characterized by period of chills, fever, headache, and malaise, followed by an asymptomatic, followed by another episode of symptoms. The cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010673:578474* | 578474 | 602337 | 23864 | Borrelia hermsii DAH, complete genome | 0 | 5747 | BLASTN svg | BLASTP svg |
NC_013123:116465* | 116465 | 136290 | 19826 | Candidatus Sulcia muelleri SMDSEM, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009089:3935500* | 3935500 | 3979165 | 43666 | Clostridium difficile 630, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010001:4730000* | 4730000 | 4755689 | 25690 | Clostridium phytofermentans ISDg, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004668:1010610* | 1010610 | 1037133 | 26524 | Enterococcus faecalis V583, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_015214:437733* | 437733 | 482599 | 44867 | Lactobacillus acidophilus 30SC chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_006814:403723* | 403723 | 445632 | 41910 | Lactobacillus acidophilus NCFM, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014724:439594* | 439594 | 485644 | 46051 | Lactobacillus amylovorus GRL 1112 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014106:419511* | 419511 | 456808 | 37298 | Lactobacillus crispatus ST1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014727:853500* | 853500 | 872099 | 18600 | Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome, | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008530:1551356* | 1551356 | 1588017 | 36662 | Lactobacillus gasseri ATCC 33323, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010080:445398* | 445398 | 469770 | 24373 | Lactobacillus helveticus DPC 4571, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_018528:446610* | 446610 | 473599 | 26990 | Lactobacillus helveticus R0052 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_005362:1651767* | 1651767 | 1690762 | 38996 | Lactobacillus johnsonii NCC 533, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015602:117939* | 117939 | 153246 | 35308 | Lactobacillus kefiranofaciens ZW3 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_004741:2081649 | 2081649 | 2113006 | 31358 | Shigella flexneri 2a str. 2457T, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004337:2098736 | 2098736 | 2128599 | 29864 | Shigella flexneri 2a str. 301, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008258:2100646 | 2100646 | 2131889 | 31244 | Shigella flexneri 5 str. 8401, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004344:589375* | 589375 | 616644 | 27270 | Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis, | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010981:712843* | 712843 | 730774 | 17932 | Wolbachia pipientis, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |