Pre_GI: BLASTN Hits

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Query: NC_008542:1021848 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 1021848, End: 1050884, Length: 29037

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015138:21101492110149213484224694Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-1591.7BLASTN svgBLASTP svg
NC_008752:36847393684739371824933511Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome2e-32149BLASTN svgBLASTP svg
NC_008340:480399*48039950429523897Alkalilimnicola ehrlichei MLHE-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011567:388358*38835841678028423Anoxybacillus flavithermus WK1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011567:2327870*2327870234959921730Anoxybacillus flavithermus WK1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011567:204772*20477222623221461Anoxybacillus flavithermus WK1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014550:2835696*2835696285851122816Arthrobacter arilaitensis Re117, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_006513:1379735*1379735146218482450Azoarcus sp. EbN1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014219:567033*56703358681719785Bacillus selenitireducens MLS10 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014976:1174430*1174430119919524766Bacillus subtilis BSn5 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_002528:31191*311915005118861Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete1e-0869.9BLASTN svgBLASTP svg
NC_004061:31500*315005549924000Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008060:47686147686150729730437Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence039850BLASTN svgBLASTP svg
NC_010508:981377*981377100519623820Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence07840BLASTN svgBLASTP svg
NC_012724:82983082983085458124752Burkholderia glumae BGR1 chromosome 1, complete genome0662BLASTN svgBLASTP svg
NC_010804:831000*83100085316922170Burkholderia multivorans ATCC 17616 chromosome 1, complete01959BLASTN svgBLASTP svg
NC_010623:18814318814321521527073Burkholderia phymatum STM815 chromosome 2, complete sequence4e-18101BLASTN svgBLASTP svg
NC_009078:27187412718741276343044690Burkholderia pseudomallei 1106a chromosome II, complete sequence7e-23117BLASTN svgBLASTP svg
NC_007435:14469161446916149170044785Burkholderia pseudomallei 1710b chromosome II, complete sequence7e-23117BLASTN svgBLASTP svg
NC_009074:2970435*2970435301145841024Burkholderia pseudomallei 668 chromosome I, complete sequence02668BLASTN svgBLASTP svg
NC_006351:27597082759708280620746500Burkholderia pseudomallei K96243 chromosome 2, complete sequence7e-23117BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007510:943068*94306896450321436Burkholderia sp. 383 chromosome 1, complete sequence02615BLASTN svgBLASTP svg
NC_014117:2608000*2608000263073122732Burkholderia sp. CCGE1002 chromosome chromosome 1, complete4e-166593BLASTN svgBLASTP svg
NC_002696:3759551*3759551378932829778Caulobacter crescentus CB15, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010995:11398671139867116646126595Cellvibrio japonicus Ueda107, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010002:45084674508467453496626500Delftia acidovorans SPH-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012214:2805297*2805297283239127095Erwinia pyrifoliae Ep1/96, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008563:14755001475500149389218393Escherichia coli APEC O1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010468:4455201*4455201447359918399Escherichia coli ATCC 8739, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009801:14193241419324143859919276Escherichia coli E24377A, complete genome1e-0869.9BLASTN svgBLASTP svg
CU928160:4248621*4248621427441825798Escherichia coli IAI1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011750:4543135*4543135456499721863Escherichia coli IAI39 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_000913:4159090*4159090417760618517Escherichia coli K12, complete genome1e-1179.8BLASTN svgBLASTP svg
CP002516:2580774*2580774260629825525Escherichia coli KO11, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010473:4256000*4256000427821222213Escherichia coli str. K-12 substr. DH10B, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007946:3683371*3683371370609922729Escherichia coli UTI89, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012793:2122036*2122036214675524720Geobacillus sp. WCH70, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007645:6350079*6350079637233822260Hahella chejuensis KCTC 2396, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008789:942309*94230996834126033Halorhodospira halophila SL1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010172:480000*48000053036650367Methylobacterium extorquens PA1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_013960:2440453*2440453245844817996Nitrosococcus halophilus Nc4 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_004193:375416*375416683449308034Oceanobacillus iheyensis HTE831, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015690:7518732*7518732754209923368Paenibacillus mucilaginosus KNP414 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome4e-18101BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-1281.8BLASTN svgBLASTP svg
NC_008027:71350071350073434320844Pseudomonas entomophila L48, complete genome1e-82315BLASTN svgBLASTP svg
NC_009439:34850003485000350721722218Pseudomonas mendocina ymp, complete genome3e-43184BLASTN svgBLASTP svg
NC_006511:4119332*4119332413716217831Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-1179.8BLASTN svgBLASTP svg
NC_003198:3586000*3586000360812122122Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1179.8BLASTN svgBLASTP svg
NC_015437:2164997*2164997218559920603Selenomonas sputigena ATCC 35185 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008044:1401814*1401814142133819525Silicibacter sp. TM1040, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007622:1842000*1842000189289150892Staphylococcus aureus RF122, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_012121:15781901578190160311524926Staphylococcus carnosus subsp. carnosus TM300, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007086:39672339672342172325001Xanthomonas campestris pv. campestris str. 8004, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_003902:39600039600042428128282Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete9e-1383.8BLASTN svgBLASTP svg
NC_010688:1192410*1192410126259970190Xanthomonas campestris pv. campestris, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010688:38700038700041036023361Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007508:38650003865000390220337204Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome6e-1177.8BLASTN svgBLASTP svg