Pre_GI: BLASTN Hits

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Query: NC_008268:5745620 Rhodococcus sp. RHA1, complete genome

Start: 5745620, End: 5767099, Length: 21480

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007953:35349635349637159918104Burkholderia xenovorans LB400 chromosome 3, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008278:2732890*2732890278559152702Frankia alni ACN14a, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_007794:56162356162358520423582Novosphingobium aromaticivorans DSM 12444, complete genome2e-40174BLASTN svgBLASTP svg
NC_007794:15044491504449153289128443Novosphingobium aromaticivorans DSM 12444, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015594:16084816084817873017883Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete5e-23117BLASTN svgBLASTP svg