Pre_GI: BLASTN Hits

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Query: NC_008268:442657 Rhodococcus sp. RHA1, complete genome

Start: 442657, End: 462812, Length: 20156

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009074:21175002117500214668929190Burkholderia pseudomallei 668 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_018581:32537313253731327470920979Gordonia sp. KTR9 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008314:1955793*1955793197880923017Ralstonia eutropha H16 chromosome 2, complete sequence2e-0661.9BLASTN svgBLASTP svg