Pre_GI: BLASTN Hits

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Query: NC_008253:1938975 Escherichia coli 536, complete genome

Start: 1938975, End: 2001603, Length: 62629

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008150:1420825*1420825146012739303Yersinia pestis Antiqua, complete genome059200BLASTN svgBLASTP svg
NC_004088:2640440*2640440268328342844Yersinia pestis KIM, complete genome059200BLASTN svgBLASTP svg
NC_003143:2137945*2137945217709939155Yersinia pestis CO92, complete genome059190BLASTN svgBLASTP svg
NC_005810:1794490*1794490183441839929Yersinia pestis biovar Microtus str. 91001, complete genome059190BLASTN svgBLASTP svg
NC_006155:1916426*1916426195791941494Yersinia pseudotuberculosis IP 32953, complete genome059170BLASTN svgBLASTP svg
NC_010159:21645002164500220861544116Yersinia pestis Angola, complete genome059160BLASTN svgBLASTP svg
NC_010634:1916000*1916000195790341904Yersinia pseudotuberculosis PB1/+, complete genome059130BLASTN svgBLASTP svg
NC_011751:2281653*2281653230787726225Escherichia coli UMN026 chromosome, complete genome050660BLASTN svgBLASTP svg
NC_007946:2074098*2074098210032326226Escherichia coli UTI89, complete genome050650BLASTN svgBLASTP svg
NC_011748:2237099*2237099226332326225Escherichia coli 55989, complete genome050650BLASTN svgBLASTP svg
CU928145:2237099*2237099226332326225Escherichia coli 55989 chromosome, complete genome050650BLASTN svgBLASTP svg
NC_008563:20948552094855212109926245Escherichia coli APEC O1, complete genome050310BLASTN svgBLASTP svg
NC_011750:1134721*1134721116006625346Escherichia coli IAI39 chromosome, complete genome049170BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome033760BLASTN svgBLASTP svg
CP002797:20253302025330205156426235Escherichia coli NA114, complete genome026570BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome013170BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome013160BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome013150BLASTN svgBLASTP svg
NC_008563:20413452041345206368122337Escherichia coli APEC O1, complete genome012650BLASTN svgBLASTP svg
NC_009801:21591232159123218213823016Escherichia coli E24377A, complete genome011510BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome011500BLASTN svgBLASTP svg
NC_010473:2119480*2119480215635336874Escherichia coli str. K-12 substr. DH10B, complete genome011480BLASTN svgBLASTP svg
NC_002695:26554452655445267786922425Escherichia coli O157:H7 str. Sakai, complete genome011470BLASTN svgBLASTP svg
NC_000913:2028472*2028472205003821567Escherichia coli K12, complete genome011470BLASTN svgBLASTP svg
AC_000091:2027648*2027648207009942452Escherichia coli W3110 DNA, complete genome011470BLASTN svgBLASTP svg
AP010958:22729192272919229869725779Escherichia coli O103:H2 str. 12009 DNA, complete genome011460BLASTN svgBLASTP svg
CP002516:1902431*1902431192618823758Escherichia coli KO11, complete genome011460BLASTN svgBLASTP svg
CP002185:2181936*2181936220473822803Escherichia coli W, complete genome011460BLASTN svgBLASTP svg
NC_002655:27306592730659276187131213Escherichia coli O157:H7 EDL933, complete genome011440BLASTN svgBLASTP svg
CU928160:2091249*2091249211444123193Escherichia coli IAI1 chromosome, complete genome011430BLASTN svgBLASTP svg
NC_009800:20493462049346207518725842Escherichia coli HS, complete genome011420BLASTN svgBLASTP svg
NC_020181:527592*52759257518147590Enterobacter aerogenes EA1509E, complete genome011200BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome09723BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,02143BLASTN svgBLASTP svg
NC_021066:601029*60102962413023102Raoultella ornithinolytica B6, complete genome01748BLASTN svgBLASTP svg
NC_013716:2139952*2139952219678356832Citrobacter rodentium ICC168, complete genome01683BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome01477BLASTN svgBLASTP svg
NC_011740:1991941*1991941201386221922Escherichia fergusonii ATCC 35469, complete genome0997BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome1e-137500BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome1e-137500BLASTN svgBLASTP svg
NC_010067:892729*89272992523832510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete7e-111410BLASTN svgBLASTP svg
NC_013592:2968500*2968500300769039191Dickeya dadantii Ech586, complete genome2e-83319BLASTN svgBLASTP svg
NC_004631:948054*94805498991041857Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-76295BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome3e-67266BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome1e-66264BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome6e-65258BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome2e-64256BLASTN svgBLASTP svg
AP010958:2455052*2455052247359918548Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-45192BLASTN svgBLASTP svg
CP002797:2062006*2062006208330121296Escherichia coli NA114, complete genome3e-45192BLASTN svgBLASTP svg
NC_000913:2042935*2042935206659923665Escherichia coli K12, complete genome3e-45192BLASTN svgBLASTP svg
NC_009800:2083465*2083465210667323209Escherichia coli HS, complete genome3e-45192BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome3e-45192BLASTN svgBLASTP svg
NC_013850:1753716*1753716178468730972Klebsiella variicola At-22 chromosome, complete genome3e-45192BLASTN svgBLASTP svg
NC_015663:4906652*4906652493024623595Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-45192BLASTN svgBLASTP svg
NC_003143:1973867*1973867199917525309Yersinia pestis CO92, complete genome7e-43184BLASTN svgBLASTP svg
NC_004547:1873390*1873390193737663987Erwinia carotovora subsp. atroseptica SCRI1043, complete genome7e-43184BLASTN svgBLASTP svg
NC_008149:2652825*2652825267618023356Yersinia pestis Nepal516, complete genome7e-43184BLASTN svgBLASTP svg
NC_010102:997417*997417101802320607Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,7e-43184BLASTN svgBLASTP svg
NC_010159:1710268*1710268173543325166Yersinia pestis Angola, complete genome7e-43184BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome7e-43184BLASTN svgBLASTP svg
NC_013421:18190361819036185909940064Pectobacterium wasabiae WPP163, complete genome3e-42182BLASTN svgBLASTP svg
NC_013421:30939953093995311483420840Pectobacterium wasabiae WPP163, complete genome3e-42182BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome3e-42182BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome3e-42182BLASTN svgBLASTP svg
NC_020211:3398281*3398281342338225102Serratia marcescens WW4, complete genome3e-42182BLASTN svgBLASTP svg
NC_014837:2758239*2758239277859920361Pantoea sp. At-9b chromosome, complete genome5e-41178BLASTN svgBLASTP svg
NC_014500:1646854*1646854167518028327Dickeya dadantii 3937 chromosome, complete genome5e-41178BLASTN svgBLASTP svg
NC_007712:1893066*1893066191459921534Sodalis glossinidius str. 'morsitans', complete genome5e-41178BLASTN svgBLASTP svg
NC_015566:3417951*3417951345859940649Serratia sp. AS12 chromosome, complete genome2e-40176BLASTN svgBLASTP svg
NC_012214:1650523*1650523168104730525Erwinia pyrifoliae Ep1/96, complete genome2e-40176BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome7e-40174BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome7e-40174BLASTN svgBLASTP svg
NC_015224:1914833*1914833193998525153Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-38168BLASTN svgBLASTP svg
NC_012912:2901021*2901021292518824168Dickeya zeae Ech1591, complete genome4e-38168BLASTN svgBLASTP svg
NC_014562:1883517*1883517190910525589Pantoea vagans C9-1 chromosome, complete genome2e-37167BLASTN svgBLASTP svg
NC_014306:3006028*3006028304213136104Erwinia billingiae Eb661, complete genome4e-35159BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome4e-35159BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome7e-34155BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome3e-33153BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-26131BLASTN svgBLASTP svg
NC_008786:27296352729635277134341709Verminephrobacter eiseniae EF01-2, complete genome6e-25125BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-24123BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome9e-24121BLASTN svgBLASTP svg
NC_012912:16707841670784169159920816Dickeya zeae Ech1591, complete genome5e-19105BLASTN svgBLASTP svg
NC_014500:89413689413693546441329Dickeya dadantii 3937 chromosome, complete genome2e-18103BLASTN svgBLASTP svg
NC_011184:2421687*2421687244877527089Vibrio fischeri MJ11 chromosome I, complete sequence1e-1697.6BLASTN svgBLASTP svg
NC_011149:20403962040396206929628901Salmonella enterica subsp. enterica serovar Agona str. SL483,8e-1591.7BLASTN svgBLASTP svg
NC_010939:1986263*1986263202856742305Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete3e-1179.8BLASTN svgBLASTP svg
NC_009053:1942973*1942973197934536373Actinobacillus pleuropneumoniae L20, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_011748:82436782436784378119415Escherichia coli 55989, complete genome1e-1077.8BLASTN svgBLASTP svg
CU928145:82436782436784378119415Escherichia coli 55989 chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_003295:27873712787371282580238432Ralstonia solanacearum GMI1000, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_010067:3204682*3204682322388819207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-0973.8BLASTN svgBLASTP svg
NC_003198:4513900*4513900454590232003Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0869.9BLASTN svgBLASTP svg
NC_010067:4418000*4418000444281924820Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-0767.9BLASTN svgBLASTP svg
NC_009648:3720000*3720000374226022261Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007298:1129889*1129889115580225914Dechloromonas aromatica RCB, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_008463:4867504*4867504489101123508Pseudomonas aeruginosa UCBPP-PA14, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_012559:85450785450789459940093Laribacter hongkongensis HLHK9, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_014121:2745097*2745097276822023124Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete5e-0765.9BLASTN svgBLASTP svg
NC_014394:707305*70730573388526581Gallionella capsiferriformans ES-2 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_011080:11669511166951119330926359Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-0663.9BLASTN svgBLASTP svg
NC_003198:1078113*1078113110191423802Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-0661.9BLASTN svgBLASTP svg
NC_004631:1881214*1881214190534324130Salmonella enterica subsp. enterica serovar Typhi Ty2, complete7e-0661.9BLASTN svgBLASTP svg
NC_005810:11302511130251115417023920Yersinia pestis biovar Microtus str. 91001, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_006511:1808815*1808815183245923645Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC7e-0661.9BLASTN svgBLASTP svg
NC_008686:50750*507507732426575Paracoccus denitrificans PD1222 chromosome 1, complete sequence7e-0661.9BLASTN svgBLASTP svg
NC_008781:19738261973826199696823143Polaromonas naphthalenivorans CJ2, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010102:2020762*2020762204160320842Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,7e-0661.9BLASTN svgBLASTP svg
NC_011149:1035990*1035990106096324974Salmonella enterica subsp. enterica serovar Agona str. SL483,7e-0661.9BLASTN svgBLASTP svg
NC_003197:1170746*1170746119097320228Salmonella typhimurium LT2, complete genome7e-0661.9BLASTN svgBLASTP svg