Pre_GI: BLASTN Hits

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Query: NC_008043:86470 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 86470, End: 108480, Length: 22011

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015730:36933913693391372064027250Roseobacter litoralis Och 149 chromosome, complete genome3e-77297BLASTN svgBLASTP svg
NC_003911:3864852*3864852389829633445Silicibacter pomeroyi DSS-3, complete genome2e-71278BLASTN svgBLASTP svg
NC_008686:1960034*1960034199164331610Paracoccus denitrificans PD1222 chromosome 1, complete sequence3e-27131BLASTN svgBLASTP svg
NC_007762:889798897911484025862Rhizobium etli CFN 42 plasmid p42a, complete sequence3e-24121BLASTN svgBLASTP svg
NC_008380:85524685524689413738892Rhizobium leguminosarum bv. viciae 3841, complete genome1e-20109BLASTN svgBLASTP svg
NC_016027:19028541902854193735834505Gluconacetobacter xylinus NBRC 3288, complete genome1e-20109BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008314:27445532744553278801643464Ralstonia eutropha H16 chromosome 2, complete sequence7e-1383.8BLASTN svgBLASTP svg
NC_008347:30341003034100305916425065Maricaulis maris MCS10, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010125:2884762*2884762294559960838Gluconacetobacter diazotrophicus PAl 5, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020453:68215006821500685438832889Agromonas oligotrophica S58 DNA, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009778:14778411477841150009922259Enterobacter sakazakii ATCC BAA-894, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011894:2184956*2184956220848223527Methylobacterium nodulans ORS 2060, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020260:1535394*1535394155809922706Cronobacter sakazakii Sp291, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010725:4618000*4618000464104723048Methylobacterium populi BJ001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008942:27436274364868421249Methanocorpusculum labreanum Z, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003888:55505825550582557168721106Streptomyces coelicolor A3(2), complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008044:1401814*1401814142133819525Silicibacter sp. TM1040, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010505:50356685035668506954133874Methylobacterium radiotolerans JCM 2831, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010510:339879*33987937475134873Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete1e-0869.9BLASTN svgBLASTP svg
NC_012912:40718594071859411755145693Dickeya zeae Ech1591, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007298:1418500*1418500146207243573Dechloromonas aromatica RCB, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008463:17564341756434177764821215Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010688:28501642850164287100220839Xanthomonas campestris pv. campestris, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013093:832971*83297185669123721Actinosynnema mirum DSM 43827, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,4e-0867.9BLASTN svgBLASTP svg
NC_015947:19373411937341196618728847Burkholderia sp. JV3 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010172:1522707*1522707154772725021Methylobacterium extorquens PA1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010505:43968004396800441651819719Methylobacterium radiotolerans JCM 2831, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010688:20526192052619207639423776Xanthomonas campestris pv. campestris, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010725:1419272*1419272148003860767Methylobacterium populi BJ001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011757:1627698*1627698165391426217Methylobacterium chloromethanicum CM4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003911:1265972*1265972131998654015Silicibacter pomeroyi DSS-3, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007643:2722265*2722265275282330559Rhodospirillum rubrum ATCC 11170, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014831:329983*32998335731327331Thermaerobacter marianensis DSM 12885 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015588:24682072468207249482226616Isoptericola variabilis 225 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015711:20503602050360207498124622Myxococcus fulvus HW-1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010102:21785942178594220346224869Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-0661.9BLASTN svgBLASTP svg
NC_004129:10149861014986103609921114Pseudomonas fluorescens Pf-5, complete genome3e-0661.9BLASTN svgBLASTP svg