Pre_GI: BLASTP Hits

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Query: NC_008043:615049:632864 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 632864, End: 633151, Length: 288

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009952:366959:383697383697383918222Dinoroseobacter shibae DFL 12, complete genomehypothetical protein3e-1477.4
NC_015381:2859000:289641228964122896693282Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein3e-0960.5
NC_003295:2787371:281005228100522810327276Ralstonia solanacearum GMI1000, complete genomehypothetical protein9e-0958.9
NC_008752:725189:746250746250746525276Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein9e-0958.9
NC_012560:3667177:366894136689413669210270Azotobacter vinelandii DJ, complete genomehypothetical protein8e-0958.9
NC_021150:3667176:366894036689403669209270Azotobacter vinelandii CA6, complete genomehypothetical protein8e-0958.9
NC_008577:1455000:147721114772111477495285Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-0858.5
NC_008390:2156188:218114921811492181433285Burkholderia cepacia AMMD chromosome 1, complete sequencehypothetical protein1e-0858.5
NC_006526:1976779:199386619938661994207342Zymomonas mobilis subsp. mobilis ZM4, complete genomehypothetical protein1e-0858.5
NC_018691:3041851:306217630621763062457282Alcanivorax dieselolei B5 chromosome, complete genomePutative transcriptional regulator (DNA binding protein)1e-0858.5
NC_010943:1332243:135115813511581351448291Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-0858.2
NC_010170:4800000:482109348210934821377285Bordetella petrii, complete genomehypothetical protein3e-0857
NC_016147:1961000:198727819872781987544267Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein6e-0856.2
NC_016943:4194002:421257042125704212824255Blastococcus saxobsidens DD2, complete genomemerR family transcriptional regulator7e-0855.8
NC_010170:2246993:226665322666532266949297Bordetella petrii, complete genomehypothetical protein2e-0754.7
NC_014910:242845:265766265766266047282Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein2e-0754.3
NC_015556:2265940:228929122892912289572282Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein2e-0754.3
NC_012912:1295653:131178313117831312079297Dickeya zeae Ech1591, complete genomehypothetical protein6e-0753.1
NC_014666:1601972:160661316066131606810198Frankia sp. EuI1c chromosome, complete genomeDNA binding domain protein, excisionase family1e-0651.6
NC_012969:2136243:220829622082962209141846Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein3e-0650.4
NC_013757:1499643:150079215007921501025234Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, MerR family5e-0649.7
NC_013757:900500:918016918016918369354Geodermatophilus obscurus DSM 43160, complete genomeputative transcriptional regulator, MerR family6e-0649.7