Pre_GI: BLASTP Hits

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Query: NC_008043:615049:631198 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 631198, End: 632346, Length: 1149

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009952:366959:3822893822893834371149Dinoroseobacter shibae DFL 12, complete genomehypothetical protein6e-124444
NC_015580:141379:1603091603091614601152Novosphingobium sp. PP1Y, complete genomehypothetical protein2e-61236
NC_015731:3274739:3292076329207632934581383Nitrosomonas sp. Is79A3 chromosome, complete genomereplication initiation factor1e-0654.7
NC_009455:1025915:1033205103320510343651161Dehalococcoides sp. BAV1 chromosome, complete genomehypothetical protein5e-0652.4