Pre_GI: BLASTP Hits

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Query: NC_008043:615049:629292 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 629292, End: 630824, Length: 1533

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003911:1791878:1799149179914918007441596Silicibacter pomeroyi DSS-3, complete genomehypothetical protein6e-110398
NC_012489:3425416:3432117343211734336971581Gemmatimonas aurantiaca T-27, complete genomehypothetical protein3e-62239
NC_014958:557208:5669595669595685121554Deinococcus maricopensis DSM 21211 chromosome, complete genomehypothetical protein2e-48193
NC_013956:3273340:328452632845263285299774Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-36153
NC_009050:212270:2738632738632751521290Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein2e-1894
NC_008782:867344:8685818685818699781398Acidovorax sp. JS42, complete genomehypothetical protein4e-1893.2
NC_015424:3112637:3161632316163231631011470Aeromonas veronii B565 chromosome, complete genomehypothetical protein4e-1686.7
NC_009720:4124255:4143750414375041450361287Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-1378.2
NC_002939:173833:1814111814111827661356Geobacter sulfurreducens PCA, complete genomehypothetical protein3e-1273.9
NC_015578:1940097:1948866194886619508752010Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein3e-1273.9
NC_013222:817686:8304198304198323111893Robiginitalea biformata HTCC2501, complete genomehypothetical protein4e-1273.2
NC_009832:2211154:2221222222122222225291308Serratia proteamaculans 568, complete genomehypothetical protein6e-1272.8
NC_014973:3452100:3461099346109934626041506Geobacter sp. M18 chromosome, complete genomehypothetical protein1e-1171.6
NC_013956:3273340:328369032836903284586897Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-1170.9
NC_010162:10962500:1097143210971432109733301899Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-1170.9
NC_012521:1:3214321449291716Rhodococcus opacus B4 plasmid pROB02, complete sequencehypothetical protein3e-1170.5
NC_015410:2838132:2848182284818228500831902Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein6e-1066.2
NC_013665:2176502:2189619218961921910341416Methanocella paludicola SANAE, complete genomehypothetical protein7e-1065.9
NC_014034:1418681:1428887142888714305541668Rhodobacter capsulatus SB1003 chromosome, complete genomehypothetical protein2e-0964.7
NC_015711:6522808:655070665507066551377672Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein5e-0963.2
NC_011726:3051408:3051408305140830525441137Cyanothece sp. PCC 8801, complete genomehypothetical protein6e-0962.8
NC_015554:4824000:4828726482872648299971272Alteromonas sp. SN2 chromosome, complete genomehypothetical protein1e-0862
NC_016902:2580774:2591648259164825927571110Escherichia coli KO11FL chromosome, complete genomeputative ATP-dependent endonuclease (OLD family protein)4e-0860.1
CP002516:2580774:2591648259164825927571110Escherichia coli KO11, complete genomeputative ATP-dependent endonuclease (OLD family protein)4e-0860.1
CP002185:1493280:1513093151309315142021110Escherichia coli W, complete genomeconserved hypothetical protein4e-0860.1
NC_008536:2079052:2086235208623520873801146Solibacter usitatus Ellin6076, complete genomehypothetical protein6e-0859.7
NC_013456:212150:2201522201522212851134Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein6e-0859.3
NC_007677:1354500:138968413896841390334651Salinibacter ruber DSM 13855, complete genomehypothetical protein9e-0858.9
NC_014034:1394898:1405490140549014066081119Rhodobacter capsulatus SB1003 chromosome, complete genomehypothetical protein1e-0758.5
NC_002506:207097:2177582177582188821125Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein4e-0757
NC_009456:998935:1007212100721210083361125Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein4e-0757
NC_012580:207025:2176862176862188101125Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein4e-0757
NC_012583:242760:2526332526332537571125Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein4e-0757
NC_012667:46432:5470954709558331125Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein4e-0757
NC_016446:979884:9905339905339916571125Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein4e-0757
NC_016945:207089:2177382177382188621125Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein4e-0757
NC_016940:190986:1976891976892005292841Saprospira grandis str. Lewin chromosome, complete genomehypothetical protein3e-0757
NC_013730:4118355:4123661412366141247521092Spirosoma linguale DSM 74, complete genomeputative ATP-dependent endonuclease (OLD family protein)4e-0756.6
NC_012917:3241196:3250738325073832524051668Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein5e-0756.2
NC_012968:507988:5171145171145182381125Methylotenera mobilis JLW8, complete genomeconserved hypothetical protein, putative P-loop containing nucleoside triphosphate hydrolase7e-0755.8
NC_014394:1658357:1675095167509516762221128Gallionella capsiferriformans ES-2 chromosome, complete genomeputative ATPase; putative exported protein9e-0755.5
NC_009454:136468:1493581493581504491092Pelotomaculum thermopropionicum SI, complete genomehypothetical protein5e-0653.1
NC_008740:1635137:1643936164393616451111176Marinobacter aquaeolei VT8, complete genomehypothetical protein5e-0653.1