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Query: NC_008043:167108:173192 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 173192, End: 173306, Length: 115

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008044:136844:150399150399150513115Silicibacter sp. TM1040, complete genome5S ribosomal RNA2e-1374.3
NC_008043:499399:511430511430511544115Silicibacter sp. TM1040 mega plasmid, complete sequence5S ribosomal RNA2e-1374.3
NC_008043:615049:627682627682627796115Silicibacter sp. TM1040 mega plasmid, complete sequence5S ribosomal RNA2e-1374.3
NC_007802:4071006:407879640787964078910115Jannaschia sp. CCS1, complete genome5S ribosomal RNA8e-0752.4