Pre_GI: BLASTN Hits

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Query: NC_007958:4985 Rhodopseudomonas palustris BisB5, complete genome

Start: 4985, End: 28395, Length: 23411

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013854:31263853126385315026623882Azospirillum sp. B510, complete genome4e-76293BLASTN svgBLASTP svg
NC_007347:1*12859628596Ralstonia eutropha JMP134 chromosome 1, complete sequence6e-69270BLASTN svgBLASTP svg
NC_009076:75535*7553510652630992Burkholderia pseudomallei 1106a chromosome I, complete sequence2e-62248BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome3e-61244BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome5e-57230BLASTN svgBLASTP svg
NC_011662:114205242052Thauera sp. MZ1T, complete genome3e-55224BLASTN svgBLASTP svg
NC_012724:1*11851018510Burkholderia glumae BGR1 chromosome 1, complete genome2e-53218BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome3e-52214BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome3e-52214BLASTN svgBLASTP svg
NC_008702:111506115061Azoarcus sp. BH72, complete genome2e-50208BLASTN svgBLASTP svg
NC_010804:52000*520007319121192Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-50208BLASTN svgBLASTP svg
NC_002516:6255854*6255854627999924146Pseudomonas aeruginosa PAO1, complete genome3e-49204BLASTN svgBLASTP svg
NC_009952:3522370*3522370356180439435Dinoroseobacter shibae DFL 12, complete genome1e-48202BLASTN svgBLASTP svg
NC_016002:111459914599Pseudogulbenkiania sp. NH8B, complete genome2e-47198BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome1e-45192BLASTN svgBLASTP svg
NC_014323:111610816108Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-45192BLASTN svgBLASTP svg
NC_008313:113975239752Ralstonia eutropha H16 chromosome 1, complete sequence7e-44186BLASTN svgBLASTP svg
NC_010682:112474724747Ralstonia pickettii 12J chromosome 1, complete sequence3e-43184BLASTN svgBLASTP svg
NC_006513:16954871695487172039324907Azoarcus sp. EbN1, complete genome1e-42182BLASTN svgBLASTP svg
NC_005085:111651116511Chromobacterium violaceum ATCC 12472, complete genome6e-38167BLASTN svgBLASTP svg
NC_015138:111600416004Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-30141BLASTN svgBLASTP svg
NC_009512:111886218862Pseudomonas putida F1, complete genome1e-29139BLASTN svgBLASTP svg
NC_008435:23680002368000241142943430Rhodopseudomonas palustris BisA53, complete genome2e-28135BLASTN svgBLASTP svg
NC_014722:115359353593Burkholderia rhizoxinica HKI 454, complete genome9e-28133BLASTN svgBLASTP svg
NC_002947:8394*83945373745344Pseudomonas putida KT2440, complete genome4e-27131BLASTN svgBLASTP svg
NC_015422:111870118701Alicycliphilus denitrificans K601 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_013165:3146000*3146000318049934500Slackia heliotrinireducens DSM 20476, complete genome6e-26127BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome3e-24121BLASTN svgBLASTP svg
NC_015677:112102721027Ramlibacter tataouinensis TTB310 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_013959:28015572801557282605124495Sideroxydans lithotrophicus ES-1 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_020209:4768500*4768500481226743768Pseudomonas poae RE*1-1-14, complete genome8e-22113BLASTN svgBLASTP svg
NC_010501:111882518825Pseudomonas putida W619, complete genome3e-21111BLASTN svgBLASTP svg
NC_015856:112197121971Collimonas fungivorans Ter331 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_014318:369136912533921649Amycolatopsis mediterranei U32 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-18101BLASTN svgBLASTP svg
NC_013204:3613824*3613824364749933676Eggerthella lenta DSM 2243, complete genome3e-18101BLASTN svgBLASTP svg
NC_010681:111969219692Burkholderia phytofirmans PsJN chromosome 1, complete sequence3e-18101BLASTN svgBLASTP svg
NC_007333:3626510*3626510365399927490Thermobifida fusca YX, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007333:111820218202Thermobifida fusca YX, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014844:35826773582677360568023004Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_015389:2101841*2101841212999928159Coriobacterium glomerans PW2 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014972:37716423771642379462522984Desulfobulbus propionicus DSM 2032 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011059:112057920579Prosthecochloris aestuarii DSM 271, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_013595:10329633*103296331035599926367Streptosporangium roseum DSM 43021, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014830:4012999*4012999403999927001Intrasporangium calvum DSM 43043 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010172:3946644*3946644397036123718Methylobacterium extorquens PA1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014363:2035141*2035141206649931359Olsenella uli DSM 7084 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015125:1597600*1597600161635218753Microbacterium testaceum StLB037, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007794:23047682304768232593121164Novosphingobium aromaticivorans DSM 12444, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010816:1660066*1660066168402823963Bifidobacterium longum DJO10A, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013093:111124311243Actinosynnema mirum DSM 43827, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014217:16398163984140525008Starkeya novella DSM 506 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015067:2371428*2371428239399922572Bifidobacterium longum subsp. longum JCM 1217, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015953:3684065*3684065371159927535Streptomyces sp. SirexAA-E chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015572:115300753007Methylomonas methanica MC09 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011886:4376261*4376261440799931739Arthrobacter chlorophenolicus A6, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008541:4679022*4679022470999930978Arthrobacter sp. FB24 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007776:1797699*1797699181766519967Synechococcus sp. JA-2-3B'a(2-13), complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009952:749426*74942677238922964Dinoroseobacter shibae DFL 12, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013521:4240468*4240468426799927532Sanguibacter keddieii DSM 10542, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013510:1*11865618656Thermomonospora curvata DSM 43183, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011004:40739164073916411759943684Rhodopseudomonas palustris TIE-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018750:3964784*3964784398396119178Streptomyces venezuelae ATCC 10712, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010814:409940992609221994Geobacter lovleyi SZ, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015145:4232283*4232283426249930217Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014550:3839389*3839389387099931611Arthrobacter arilaitensis Re117, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014375:21761221761224296425353Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008711:4579997*4579997460549925503Arthrobacter aurescens TC1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015709:1769806*1769806180153131726Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, complete7e-0763.9BLASTN svgBLASTP svg
NC_018531:4718904*4718904474449925596Arthrobacter sp. Rue61a chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007484:58010658010660029820193Nitrosococcus oceani ATCC 19707, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007498:3655304*3655304367749922196Pelobacter carbinolicus DSM 2380, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007510:28051212805121282621621096Burkholderia sp. 383 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_010551:25378762537876256370525830Burkholderia ambifaria MC40-6 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_011892:30643730643732536818932Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete3e-0661.9BLASTN svgBLASTP svg
NC_011894:57514175751417577424522829Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011894:65168566516856654688430029Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011894:77020007702000773211530116Methylobacterium nodulans ORS 2060, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007164:2446879*2446879247349926621Corynebacterium jeikeium K411, complete genome3e-0661.9BLASTN svgBLASTP svg