Pre_GI: BLASTP Hits

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Query: NC_007952:1934249:1939811 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 1939811, End: 1940026, Length: 216

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015660:1869962:187473518747351874935201Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein6e-1476.3
NC_017265:1346685:135786613578661358063198Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-0857.8
NC_017168:2394079:240612624061262406323198Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-0857.8
NC_010465:1550617:156639515663951566592198Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-0857.8
NC_010634:3129174:313808331380833138280198Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-0857.8
NC_005810:2905362:291427129142712914468198Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-0857.8
NC_003143:3346834:335574333557433355940198Yersinia pestis CO92, complete genomehypothetical protein2e-0857.8
NC_006155:3212796:322033032203303220527198Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-0857.8