Pre_GI: BLASTP Hits

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Query: NC_007951:3631772:3643600 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3643600, End: 3644499, Length: 900

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010617:1910388:191957219195721920435864Kocuria rhizophila DC2201, complete genomeputative NAD(P)H--quinone oxidoreductase2e-1376.6
NC_009342:1570000:158425915842591585107849Corynebacterium glutamicum R chromosome, complete genomehypothetical protein6e-0961.6
NC_015671:3211972:322471732247173225589873Cellvibrio gilvus ATCC 13127 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0860.5
NC_006322:203932:220274220274221146873Bacillus licheniformis ATCC 14580, complete genomehypothetical protein4e-0755.5
NC_006510:372826:394522394522395397876Geobacillus kaustophilus HTA426, complete genomehypothetical protein5e-0755.5
NC_020126:1943092:197870519787051979544840Myxococcus stipitatus DSM 14675, complete genomeNmrA family protein3e-0652.4
NC_020418:2868000:287602628760262876874849Morganella morganii subsp. morganii KT, complete genomeNADPH quinone oxidoreductase 25e-0652
NC_010407:3132683:313317831331783134041864Clavibacter michiganensis subsp. sepedonicus chromosome, completehypothetical protein9e-0651.2