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Query: NC_007949:121747 Polaromonas sp. JS666 plasmid 1, complete sequence

Start: 121747, End: 146099, Length: 24353

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011662:31783131783134822530395Thauera sp. MZ1T, complete genome0979BLASTN svgBLASTP svg
NC_014394:94201594201596663724623Gallionella capsiferriformans ES-2 chromosome, complete genome1e-73285BLASTN svgBLASTP svg
NC_015740:29661842966184299075224569Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-68268BLASTN svgBLASTP svg
NC_007626:22047672204767226720262436Magnetospirillum magneticum AMB-1, complete genome1e-48202BLASTN svgBLASTP svg
NC_008609:2446246*2446246249438248137Pelobacter propionicus DSM 2379, complete genome1e-26129BLASTN svgBLASTP svg
NC_009800:349592*34959238017230581Escherichia coli HS, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010404:55908559087838822481Acinetobacter baumannii plasmid p3ABAYE, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_012796:4075583*40755834200283124701Desulfovibrio magneticus RS-1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002937:2068117*2068117214464576529Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete5e-0867.9BLASTN svgBLASTP svg
NC_008740:63787063787065871720848Marinobacter aquaeolei VT8, complete genome2e-0765.9BLASTN svgBLASTP svg