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Query: NC_007948:5026122 Polaromonas sp. JS666, complete genome

Start: 5026122, End: 5048439, Length: 22318

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014931:25114232511423253417122749Variovorax paradoxus EPS chromosome, complete genome4e-36161BLASTN svgBLASTP svg
NC_015563:32030123203012325659153580Delftia sp. Cs1-4 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_010002:43265094326509435151425006Delftia acidovorans SPH-1, complete genome8e-22113BLASTN svgBLASTP svg
NC_010524:47887534788753481217723425Leptothrix cholodnii SP-6, complete genome3e-21111BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome8e-19103BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007614:16628741662874168304820175Nitrosospira multiformis ATCC 25196 chromosome 1, complete3e-0971.9BLASTN svgBLASTP svg
NC_004757:27300572730057278354453488Nitrosomonas europaea ATCC 19718, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015458:2338437*2338437237239533959Pusillimonas sp. T7-7 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015968:1709680*1709680173221922540Enterobacter asburiae LF7a chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010498:4821519*4821519484497023452Escherichia coli SMS-3-5, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008258:4345400*4345400436989824499Shigella flexneri 5 str. 8401, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003902:1858349*1858349191581657468Xanthomonas campestris pv. campestris str. ATCC 33913, complete2e-0765.9BLASTN svgBLASTP svg
NC_015968:511282*51128254179030509Enterobacter asburiae LF7a chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008781:10381581038158106236824211Polaromonas naphthalenivorans CJ2, complete genome7e-0763.9BLASTN svgBLASTP svg
CU928160:4570498*4570498461509944602Escherichia coli IAI1 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014121:2629075*2629075265233623262Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_007492:36555453655545368613730593Pseudomonas fluorescens PfO-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007492:29940362994036302311329078Pseudomonas fluorescens PfO-1, complete genome3e-0661.9BLASTN svgBLASTP svg