Pre_GI: BLASTP Hits

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Query: NC_007948:5026122:5026122 Polaromonas sp. JS666, complete genome

Start: 5026122, End: 5027099, Length: 978

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014758:1387470:1408979140897914100461068Calditerrivibrio nitroreducens DSM 19672 chromosome, completeextracellular solute-binding protein, family 76e-0652
NC_007963:1190847:121161812116181212556939Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter, DctP subunit1e-0757.8
NC_009342:2528426:253889925388992539822924Corynebacterium glutamicum R chromosome, complete genomehypothetical protein8e-23107
NC_020302:3014483:303342130334213034347927Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein1e-25117
NC_020911:3046916:306024730602473061245999Octadecabacter antarcticus 307, complete genomeTRAP transporter periplasmatic solute-binding protein DctP3e-0962.8
NC_008820:2512518:2512518251251825136421125Prochlorococcus marinus str. MIT 9303, complete genomepossible Tripartite transporter component (TRAP-T family), substrate binding protein5e-1272
NC_007969:1076287:1077587107758710786391053Psychrobacter cryohalolentis K5, complete genomeTRAP dicarboxylate transporter- DctP subunit3e-1169.7
NC_015458:1692401:169891516989151699898984Pusillimonas sp. T7-7 chromosome, complete genomeTRAP dicarboxylate transporter, DctP subunit5e-0652.4
NC_021066:3028421:3048132304813230491691038Raoultella ornithinolytica B6, complete genomehypothetical protein4e-0962.8
NC_009832:110239:1319071319071329201014Serratia proteamaculans 568, complete genomeTRAP dicarboxylate transporter, DctP subunit9e-1064.7
NC_010506:4404377:4414103441410344151971095Shewanella woodyi ATCC 51908, complete genomeTRAP dicarboxylate transporter- DctP subunit2e-0963.5
NC_008312:6801445:6816642681664268177271086Trichodesmium erythraeum IMS101, complete genomeTRAP dicarboxylate transporter- DctP subunit3e-0653.1