Pre_GI: BLASTP Hits

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Query: NC_007946:2931364:2935003 Escherichia coli UTI89, complete genome

Start: 2935003, End: 2935677, Length: 675

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:2863316:286734128673412868015675Escherichia coli S88 chromosome, complete genomerepressor protein phage e14; e14 prophage9e-132469
NC_000913:1188999:120148212014821202156675Escherichia coli K12, complete genomee14 prophage; repressor protein phage e149e-132469
NC_008563:2946391:295003029500302950704675Escherichia coli APEC O1, complete genomeputative phage repressor9e-132469
AC_000091:1191353:120383612038361204510675Escherichia coli W3110 DNA, complete genomerepressor protein phage e149e-132469
NC_011750:5045927:505908250590825059756675Escherichia coli IAI39 chromosome, complete genomerepressor protein phage e14; e14 prophage1e-130465
NC_015663:4767443:478544147854414786193753Enterobacter aerogenes KCTC 2190 chromosome, complete genomeP22 repressor protein c25e-29127
NC_016830:5031819:504224950422495042896648Pseudomonas fluorescens F113 chromosome, complete genomepeptidase s24-like domain protein3e-24112
NC_004578:3849835:385799038579903858721732Pseudomonas syringae pv. tomato str. DC3000, complete genomerepressor protein c22e-22105
NC_010554:2646806:265134526513452651992648Proteus mirabilis HI4320, complete genomephage repressor2e-1995.9
NC_009783:1956000:195674419567441957409666Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein3e-1995.1
NC_010002:2110953:212346721234672124114648Delftia acidovorans SPH-1, complete genomepeptidase S24 and S26 domain protein3e-1995.1
NC_002947:3404000:341945034194503420181732Pseudomonas putida KT2440, complete genomepyocin R2_PP, transcriptional repressor, CI/C2 family3e-1995.1
NC_017986:5509569:552387155238715524602732Pseudomonas putida ND6 chromosome, complete genometranscriptional repressor pyocin R2 PP5e-1994.4
NC_004129:2201780:221380922138092214522714Pseudomonas fluorescens Pf-5, complete genomepeptidase S24-like domain7e-1890.9
NC_012779:2184927:220196422019642202635672Edwardsiella ictaluri 93-146, complete genomerepressor protein CI7e-1787.4
NC_007946:2625461:262998526299852630635651Escherichia coli UTI89, complete genomerepressor protein1e-1686.7
NC_011083:374000:385883385883386533651Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,P22 repressor protein c22e-1686.3
NC_009800:289000:301440301440302090651Escherichia coli HS, complete genomeP22 repressor protein c21e-1686.3
NC_012947:3015985:302163430216343022284651Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeXRE family transcriptional regulator1e-1686.3
NC_013361:3112023:312984531298453130495651Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI1e-1686.3
NC_013941:3300000:330265133026513303301651Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeP22 repressor protein c21e-1686.3
NC_004431:3040953:305923330592333059859627Escherichia coli CFT073, complete genomePutative repressor protein of prophage2e-1685.9
NC_013850:1887556:189996518999651900627663Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family9e-1683.6
NC_011770:1431740:144568614456861446441756Pseudomonas aeruginosa LESB58, complete genomehypothetical protein2e-1582.8
NC_017986:4091051:410215841021584102514357Pseudomonas putida ND6 chromosome, complete genomerepressor protein CI1e-1480.1
NC_008258:269806:287337287337287969633Shigella flexneri 5 str. 8401, complete genomeputative prophage repressor CI1e-1480.1
NC_015379:4691868:469213346921334692831699Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage regulatory protein5e-1477.8
NC_009778:2993218:301640330164033017065663Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-1477.4
NC_014306:3524980:356790335679033568601699Erwinia billingiae Eb661, complete genomeRepressor protein cI2e-1375.9
NC_020418:3133831:313802131380213138731711Morganella morganii subsp. morganii KT, complete genomerepressor protein CI2e-1273.2
NC_012660:3116500:312771631277163128423708Pseudomonas fluorescens SBW25 chromosome, complete genomee14 prophage; putative phage repressor2e-1272.8
NC_012731:2083650:209731020973102098035726Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative repressor protein of prophage2e-1272.4
NC_006138:2288261:230836023083602309070711Desulfotalea psychrophila LSv54, complete genomesimilar to repressor protein7e-1270.9
NC_011283:4212000:422109942210994221815717Klebsiella pneumoniae 342 chromosome, complete genomephage repressor protein9e-1270.5
NC_014910:1708045:172518017251801725950771Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein1e-1169.7
NC_013361:1558423:157045615704561571160705Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI5e-1167.8
NC_017047:1906000:190737719073771908024648Rahnella aquatilis HX2 chromosome, complete genomeputative repressor protein of prophage2e-1066.2
NC_011415:2153243:216098621609862161642657Escherichia coli SE11 chromosome, complete genomeputative phage repressor4e-1064.7
NC_009708:2537557:255467625546762555386711Yersinia pseudotuberculosis IP 31758 chromosome, complete genomerepressor protein C22e-0962.4
NC_015968:3301958:331235333123533313006654Enterobacter asburiae LF7a chromosome, complete genomephage repressor like XRE family transcriptional regulator3e-0962
NC_020418:2910593:291496229149622915621660Morganella morganii subsp. morganii KT, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidases)4e-0961.6
NC_015381:1173603:119000911900091190758750Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative phage repressor9e-0960.5
NC_014837:2354241:235780423578042358529726Pantoea sp. At-9b chromosome, complete genomeXRE family transcriptional regulator6e-0857.8
NC_004431:1401681:141242714124271412849423Escherichia coli CFT073, complete genomeRepressor protein1e-0757
NC_013446:3034486:304282630428263043365540Comamonas testosteroni CNB-2, complete genomeputative prophage repressor1e-0756.6
NC_008563:1175035:118767011876701188365696Escherichia coli APEC O1, complete genomeputative CI repressor of bacteriophage1e-0756.6
NC_011742:1177946:119125811912581191959702Escherichia coli S88 chromosome, complete genomeRepressor protein CI from phage origin1e-0756.6
NC_013364:2645438:265235726523572652980624Escherichia coli O111:H- str. 11128, complete genomeputative phage repressor protein CI2e-0756.2
NC_007946:1239278:125028212502821250935654Escherichia coli UTI89, complete genomeputative CI repressor of bacteriophage2e-0756.2
NC_011601:1039500:105177110517711052424654Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein2e-0756.2
NC_013941:975353:989229989229989882654Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeCI protein2e-0756.2
NC_012759:4132527:414282841428284143541714Escherichia coli BW2952 chromosome, complete genomeRepressor protein CI2e-0756.2
NC_011601:2614691:261961826196182620331714Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomerepressor protein2e-0756.2
NC_017328:303987:317642317642318337696Shigella flexneri 2002017 chromosome, complete genomeCI protein2e-0755.8
NC_016809:1778000:177820117782011778866666Haemophilus influenzae 10810, complete genomehypothetical protein2e-0755.8
NC_012791:2832001:285731328573132857981669Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, XRE family3e-0755.5
CP002207:1358597:140795814079581408578621Bacillus atrophaeus 1942, complete genomeLexA repressor3e-0755.1
NC_014639:1358597:140795814079581408578621Bacillus atrophaeus 1942 chromosome, complete genomeLexA repressor3e-0755.1
NC_002695:301939:301939301939302652714Escherichia coli O157:H7 str. Sakai, complete genomecI3e-0755.1
NC_002655:301940:301940301940302653714Escherichia coli O157:H7 EDL933, complete genomeputative cI repressor protein for prophage CP-933H3e-0755.1
NC_011353:305820:305820305820306533714Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage repressor3e-0755.1
NC_014640:4293430:433149743314974332201705Achromobacter xylosoxidans A8 chromosome, complete genomerepressor protein C2 domain-containing protein5e-0754.7
NC_015424:2726223:275560227556022756036435Aeromonas veronii B565 chromosome, complete genomephage repressor9e-0753.9
NC_013941:3182576:319016231901623190836675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein9e-0753.9
NC_007645:605500:605820605820606407588Hahella chejuensis KCTC 2396, complete genomeSOS-response transcriptional repressors (RecA-mediated autopeptidase)9e-0753.9
NC_007712:2028500:206857220685722069294723Sodalis glossinidius str. 'morsitans', complete genomephage repressor2e-0652.8
NC_005140:960261:964081964081964725645Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein2e-0652.4
NC_009348:1663870:166905016690501669733684Aeromonas salmonicida subsp. salmonicida A449, complete genomephage repressor2e-0652.4
NC_016809:389561:394152394152394811660Haemophilus influenzae 10810, complete genomehypothetical protein5e-0651.2