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Query: NC_007946:1632025:1653886 Escherichia coli UTI89, complete genome

Start: 1653886, End: 1655130, Length: 1245

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:3192817:3200378320037832016221245Yersinia pestis A1122 chromosome, complete genomeputative phage-related secreted protein0756
NC_009801:1678790:1701981170198117032011221Escherichia coli E24377A, complete genometype II/III secretion system protein4e-104378
NC_012917:2362725:2375565237556523767311167Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype II and III secretion system protein1e-79297
NC_009074:2914053:2927309292730929284931185Burkholderia pseudomallei 668 chromosome I, complete sequenceType II secretory pathway, component PulD3e-52206
NC_012724:359444:3712383712383725871350Burkholderia glumae BGR1 chromosome 1, complete genomeType II secretory pathway, component PulD1e-46187
NC_009074:3791232:3807378380737838087241347Burkholderia pseudomallei 668 chromosome I, complete sequenceType II secretory pathway, component PulD3e-44179
NC_006350:3957454:3969661396966139710371377Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative bacteriophage-related lipoprotein3e-44179
NC_007651:3719191:3727926372792637293081383Burkholderia thailandensis E264 chromosome I, complete sequenceprobable phage-related secreted protein4e-43176
NC_007947:1556437:1567389156738915685761188Methylobacillus flagellatus KT, complete genometype II and III secretion system protein2e-36153
NC_016616:2699350:2711394271139427126051212Dechlorosoma suillum PS chromosome, complete genometype II secretory pathway, component PulD2e-29130
NC_021150:1564229:1586446158644615887042259Azotobacter vinelandii CA6, complete genomegeneral secretion pathway protein D3e-1170.1
NC_012560:1564500:1586433158643315886912259Azotobacter vinelandii DJ, complete genomegeneral secretion pathway protein D3e-1170.1
NC_009831:3612206:3651949365194936540392091Shewanella sediminis HAW-EB3, complete genomeType II secretory pathway component PulD-like protein2e-1067.8
NC_008358:2638245:2655587265558726576712085Hyphomonas neptunium ATCC 15444, complete genometype II secretion system protein1e-0861.2
NC_012988:32996:3299632996353802385Methylobacterium extorquens DM4, complete genomeGeneral secretion pathway protein D4e-0859.7
NC_010172:31264:3232532325347092385Methylobacterium extorquens PA1, complete genomegeneral secretion pathway protein D5e-0859.3
NC_008347:3034100:3053668305366830557282061Maricaulis maris MCS10, complete genomegeneral secretion pathway protein D8e-0858.5
NC_015138:4584846:4596363459636345988342472Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completegeneral secretion pathway protein D3e-0756.6
NC_012912:3749156:3768180376818037702702091Dickeya zeae Ech1591, complete genomegeneral secretion pathway protein D6e-0755.8
NC_020829:1840281:1846988184698818490332046Pseudomonas denitrificans ATCC 13867, complete genometype II secretion system protein1e-0654.7
NC_008786:738791:7583807583807605422163Verminephrobacter eiseniae EF01-2, complete genomegeneral secretion pathway protein D2e-0654.3
NC_008752:4589119:4603617460361746061062490Acidovorax avenae subsp. citrulli AAC00-1, complete genomegeneral secretion pathway protein D2e-0653.9
NC_008800:3642679:3661224366122436631701947Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,general secretion pathway protein D3e-0653.1
NC_015224:1067390:1079532107953210814781947Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,general secretion pathway protein D4e-0653.1