Pre_GI: BLASTN Hits

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Query: NC_007925:4294472 Rhodopseudomonas palustris BisB18, complete genome

Start: 4294472, End: 4317680, Length: 23209

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003063:30496230496233428329322Agrobacterium tumefaciens str. C58 chromosome linear, complete7e-47196BLASTN svgBLASTP svg
NC_003305:17439391743939177259928661Agrobacterium tumefaciens str. C58 chromosome linear, complete7e-47196BLASTN svgBLASTP svg
NC_010581:29439132943913296366019748Beijerinckia indica subsp. indica ATCC 9039, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002927:2636694*2636694265936422671Bordetella bronchiseptica RB50, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010515:24491432449143247210722965Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_002696:2941644*2941644296461322970Caulobacter crescentus CB15, complete genome3e-40174BLASTN svgBLASTP svg
NC_009952:366959*36695940184134883Dinoroseobacter shibae DFL 12, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009952:3522370*3522370356180439435Dinoroseobacter shibae DFL 12, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009952:2661268*2661268268533524068Dinoroseobacter shibae DFL 12, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007626:10910001091000111043819439Magnetospirillum magneticum AMB-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007626:959684*959684100429644613Magnetospirillum magneticum AMB-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008740:3602367*3602367362072718361Marinobacter aquaeolei VT8, complete genome1e-20109BLASTN svgBLASTP svg
NC_011887:11061811061813688826271Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete3e-1591.7BLASTN svgBLASTP svg
NC_011666:16019831601983162289320911Methylocella silvestris BL2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015684:31579413157941318409926159Oligotropha carboxidovorans OM5 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011386:93114093114096230731168Oligotropha carboxidovorans OM5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003295:85677585677588209925325Ralstonia solanacearum GMI1000, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003295:15873131587313160575718445Ralstonia solanacearum GMI1000, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008435:4530797*4530797454959918803Rhodopseudomonas palustris BisA53, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007958:830000*83000086140231403Rhodopseudomonas palustris BisB5, complete genome8e-127462BLASTN svgBLASTP svg
NC_009720:43675844367584439276525182Xanthobacter autotrophicus Py2, complete genome1e-33153BLASTN svgBLASTP svg
NC_009720:41242554124255415127427020Xanthobacter autotrophicus Py2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome1e-0869.9BLASTN svgBLASTP svg