Pre_GI: BLASTN Hits

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Query: NC_007925:138927 Rhodopseudomonas palustris BisB18, complete genome

Start: 138927, End: 171099, Length: 32173

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007958:4371125*4371125441443443310Rhodopseudomonas palustris BisB5, complete genome03538BLASTN svgBLASTP svg
NC_009720:2945655*2945655296659920945Xanthobacter autotrophicus Py2, complete genome02258BLASTN svgBLASTP svg
NC_009720:251703*25170327963127929Xanthobacter autotrophicus Py2, complete genome02258BLASTN svgBLASTP svg
NC_007925:10855001085500111052825029Rhodopseudomonas palustris BisB18, complete genome01447BLASTN svgBLASTP svg
NC_014217:20207372020737204764226906Starkeya novella DSM 506 chromosome, complete genome01358BLASTN svgBLASTP svg
NC_014217:27608982760898280329642399Starkeya novella DSM 506 chromosome, complete genome01291BLASTN svgBLASTP svg
NC_009720:46407846407848874724670Xanthobacter autotrophicus Py2, complete genome01261BLASTN svgBLASTP svg
NC_008435:1131242*1131242118022248981Rhodopseudomonas palustris BisA53, complete genome01259BLASTN svgBLASTP svg
NC_008435:604772*60477264849843727Rhodopseudomonas palustris BisA53, complete genome0900BLASTN svgBLASTP svg
NC_015675:56072975607297563540128105Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-139504BLASTN svgBLASTP svg
NC_015675:45655004565500458788322384Mesorhizobium opportunistum WSM2075 chromosome, complete genome1e-126462BLASTN svgBLASTP svg
NC_002678:76380876380879373829931Mesorhizobium loti MAFF303099, complete genome3e-105391BLASTN svgBLASTP svg
NC_007406:85762585762588729129667Nitrobacter winogradskyi Nb-255, complete genome5e-70274BLASTN svgBLASTP svg
NC_007802:3252300*3252300328200829709Jannaschia sp. CCS1, complete genome2e-48202BLASTN svgBLASTP svg
NC_008435:2658986*2658986275828699301Rhodopseudomonas palustris BisA53, complete genome2e-41178BLASTN svgBLASTP svg
NC_008435:39151103915110393809922990Rhodopseudomonas palustris BisA53, complete genome9e-41176BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome9e-41176BLASTN svgBLASTP svg
NC_002678:3210751*3210751323209921349Mesorhizobium loti MAFF303099, complete genome9e-41176BLASTN svgBLASTP svg
NC_014923:1249267*1249267127291123645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-39172BLASTN svgBLASTP svg
NC_010338:359940*35994038393423995Caulobacter sp. K31, complete genome9e-35157BLASTN svgBLASTP svg
NC_003047:3419212*3419212345066231451Sinorhizobium meliloti 1021, complete genome3e-34155BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome8e-32147BLASTN svgBLASTP svg
NC_012808:157156*15715618609928944Methylobacterium extorquens AM1, complete genome1e-30143BLASTN svgBLASTP svg
NC_011757:276953*27695330159924647Methylobacterium chloromethanicum CM4, complete genome1e-30143BLASTN svgBLASTP svg
NC_010725:356609*35660937730020692Methylobacterium populi BJ001, complete genome1e-30143BLASTN svgBLASTP svg
NC_010172:280092*28009230984029749Methylobacterium extorquens PA1, complete genome1e-30143BLASTN svgBLASTP svg
NC_008380:4968492*4968492498809919608Rhizobium leguminosarum bv. viciae 3841, complete genome1e-27133BLASTN svgBLASTP svg
NC_010338:1216385*1216385124125324869Caulobacter sp. K31, complete genome2e-26129BLASTN svgBLASTP svg
NC_015857:1809500*1809500183566226163Brucella pinnipedialis B2/94 chromosome chromosome 1, complete5e-24121BLASTN svgBLASTP svg
NC_003317:190975*19097521627025296Brucella melitensis 16M chromosome I, complete sequence5e-24121BLASTN svgBLASTP svg
NC_004310:1777721*1777721180601328293Brucella suis 1330 chromosome I, complete sequence5e-24121BLASTN svgBLASTP svg
NC_006932:1795500*1795500182178126282Brucella abortus biovar 1 str. 9-941 chromosome I, complete5e-24121BLASTN svgBLASTP svg
NC_007618:1792500*1792500182000027501Brucella melitensis biovar Abortus 2308 chromosome I, complete5e-24121BLASTN svgBLASTP svg
NC_010103:1777000*1777000180418827189Brucella canis ATCC 23365 chromosome I, complete sequence5e-24121BLASTN svgBLASTP svg
NC_010167:1287000*1287000131378426785Brucella suis ATCC 23445 chromosome II, complete sequence5e-24121BLASTN svgBLASTP svg
NC_010742:1794000*1794000181909925100Brucella abortus S19 chromosome 1, complete sequence5e-24121BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome1e-21113BLASTN svgBLASTP svg
NC_014932:1232346*1232346130968277337Bartonella clarridgeiae 73, complete genome2e-20109BLASTN svgBLASTP svg
NC_002929:2589202*2589202261209922898Bordetella pertussis Tohama I, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_002928:3715492*3715492373400118510Bordetella parapertussis 12822, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_002927:4130697*4130697415192921233Bordetella bronchiseptica RB50, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008319:1272251*1272251129780025550Synechococcus sp. CC9311, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_014100:533322*53332256190028579Caulobacter segnis ATCC 21756 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009667:1076718*1076718109886222145Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_015422:1116359*1116359114310426746Alicycliphilus denitrificans K601 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-1075.8BLASTN svgBLASTP svg
NC_007435:2352954*2352954238639233439Burkholderia pseudomallei 1710b chromosome II, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_007650:2429307*2429307246662437318Burkholderia thailandensis E264 chromosome II, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_009075:587441*58744162177434334Burkholderia pseudomallei 668 chromosome II, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_009078:510525*51052554399133467Burkholderia pseudomallei 1106a chromosome II, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_014006:3124818*3124818317034545528Sphingobium japonicum UT26S chromosome 1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004463:17178901717890174815230263Bradyrhizobium japonicum USDA 110, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012483:30784*307848496154178Acidobacterium capsulatum ATCC 51196, complete genome2e-0765.9BLASTN svgBLASTP svg