Some Help

Query: NC_007005:98488:130166 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 130166, End: 130936, Length: 771

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:106000:127470127470128234765Pseudomonas syringae pv. phaseolicola 1448A, complete genomeoxidoreductase, short-chain dehydrogenase/reductase family4e-119427
NC_015556:1188500:121738012173801218150771Pseudomonas fulva 12-X chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-104377
NC_011757:1288637:129044312904431291171729Methylobacterium chloromethanicum CM4, complete genomeshort-chain dehydrogenase/reductase SDR6e-30130
NC_012668:1688500:169062916906291691336708Vibrio cholerae MJ-1236 chromosome 1, complete sequenceC factor cell-cell signaling protein1e-29130
NC_012988:1540587:154239415423941543059666Methylobacterium extorquens DM4, complete genomeshort-chain dehydrogenase/reductase SDR2e-29129
NC_017270:1755552:179230917923091793016708Vibrio cholerae LMA3984-4 chromosome chromosome I, completeC-factor, putative6e-29127
NC_013446:2237854:226147722614772262022546Comamonas testosteroni CNB-2, complete genomehypothetical protein1e-26119
NC_009050:811358:824783824783825436654Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR1e-24113
NC_007513:942500:957218957218957883666Synechococcus sp. CC9902, complete genomeshort-chain dehydrogenase/reductase (SDR) superfamily5e-1375.1
NC_007484:3035068:304975630497563050454699Nitrosococcus oceani ATCC 19707, complete genomeShort-chain dehydrogenase/reductase SDR5e-1271.6
NC_009092:2282437:232045523204552321150696Shewanella loihica PV-4, complete genomeshort-chain dehydrogenase/reductase SDR6e-1064.7
NC_007645:5160133:518868251886825189344663Hahella chejuensis KCTC 2396, complete genomeshort-chain alcohol dehydrogenase-like protein8e-1064.3
NC_008319:1306482:133612413361241336789666Synechococcus sp. CC9311, complete genomeShort-chain dehydrogenase/reductase1e-0860.1
NC_012968:1945614:194728119472811947976696Methylotenera mobilis JLW8, complete genomeshort-chain dehydrogenase/reductase SDR3e-0755.8