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Query: NC_006576:456569 Synechococcus elongatus PCC 6301, complete genome

Start: 456569, End: 482340, Length: 25772

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: Freshwater organism. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007604:1145373*1145373116859923227Synechococcus elongatus PCC 7942, complete genome018790BLASTN svgBLASTP svg
NC_005071:786000*78600081539729398Prochlorococcus marinus str. MIT 9313, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_007413:29616112961611298470023090Anabaena variabilis ATCC 29413, complete genome8e-0763.9BLASTN svgBLASTP svg