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Query: NC_006511:529424:535953 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 535953, End: 536891, Length: 939

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:529458:535987535987536925939Salmonella enterica subsp. enterica serovar Paratyphi A strouter membrane protease0647
NC_012125:1330066:133357713335771334515939Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane protease0640
NC_011083:2542876:256318625631862564124939Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,protease 70640
NC_011274:2483038:249600724960072496945939Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91outer membrane protease0640
NC_016831:531404:537932537932538870939Salmonella enterica subsp. enterica serovar Gallinarum/pullorumouter membrane protease E0640
NC_011205:2621415:263219626321962633134939Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853outer membrane protease0642
NC_011294:2492168:250510825051082506046939Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane protease0642
NC_004631:531254:537782537782538720939Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter membrane protease E0645
NC_003198:2453074:246599224659922466930939Salmonella enterica subsp. enterica serovar Typhi str. CT18,outer membrane protease E0645
NC_016832:531208:537736537736538674939Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Coagulase/fibrinolysin0645
NC_015761:2373967:239237723923772393315939Salmonella bongori NCTC 12419, complete genomeouter membrane protease E9e-167585
NC_009436:2056000:206169920616992062637939Enterobacter sp. 638, complete genomeouter membrane protease4e-135481
NC_010158:1:666366637601939Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceplasminogen activator Pla3e-134478
NC_010158:1:162711627117209939Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceplasminogen activator Pla3e-134478
NC_013941:733286:743785743785744738954Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprotease VII4e-80298
AP010958:604719:617011617011617964954Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative outer membrane protease OmpT precursor6e-80297
NC_011415:644811:657248657248658201954Escherichia coli SE11 chromosome, complete genomeouter membrane protease6e-80297
NC_013353:604719:617011617011617964954Escherichia coli O103:H2 str. 12009, complete genomeouter membrane protease OmpT precursor6e-80297
NC_013361:649518:660843660843661796954Escherichia coli O26:H11 str. 11368 chromosome, complete genomeprotease6e-80297
NC_012759:461680:486663486663487616954Escherichia coli BW2952 chromosome, complete genomeouter membrane protease9e-80296
NC_010473:498252:523235523235524188954Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; outer membrane protease VII (outer membrane protein 3b)9e-80296
NC_000913:558920:583903583903584856954Escherichia coli K12, complete genomeDLP12 prophage; outer membrane protease VII (outer membrane protein 3b)9e-80296
NC_010473:623810:636495636495637448954Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; outer membrane protease VII (outer membrane protein 3b)9e-80296
AC_000091:558920:583903583903584856954Escherichia coli W3110 DNA, complete genomeouter membrane protease VII9e-80296
NC_011751:680417:690046690046690999954Escherichia coli UMN026 chromosome, complete genomeouter membrane protease1e-79296
NC_008563:1505405:151755815175581518520963Escherichia coli APEC O1, complete genomeouter membrane protease5e-77288
NC_010067:1655815:167595116759511676919969Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-73275
NC_011747:115864:129836129836130789954Escherichia coli S88 plasmid pECOS88, complete sequenceouter membrane protease3e-69262
NC_004851:191709:220300220300221247948Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIcsP (SopA), outermembrane protease of the OmpP family, involved in cleavage of surface exposed IcsA1e-58226
NC_013971:817284:832824832824833765942Erwinia amylovora ATCC 49946 chromosome, complete genomeouter membrane protease9e-43174
NC_013961:2932348:294017729401772941115939Erwinia amylovora, complete genomeIcsP/SopA1e-42173
NC_013961:2932348:293762029376202938558939Erwinia amylovora, complete genomeIcsP/SopA1e-42173
NC_013971:817284:830267830267831208942Erwinia amylovora ATCC 49946 chromosome, complete genomeouter membrane protease2e-42173