Pre_GI: BLASTP Hits

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Query: NC_006511:529424:532441 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 532441, End: 534448, Length: 2008

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1330066:1330066133006613320722007Salmonella enterica subsp. enterica serovar Paratyphi C strainphosphoglycerate transport system sensor protein PgtB1e-130467
NC_011274:2483038:2498450249845025004562007Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phosphoglycerate transport system sensor protein PgtB1e-130467
NC_011294:2492168:2507551250755125095572007Salmonella enterica subsp. enterica serovar Enteritidis strphosphoglycerate transport system sensor protein PgtB1e-130467
NC_011083:2542876:2565629256562925676352007Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phosphoglycerate transport system sensor protein PgtB2e-130467
NC_011205:2621415:2634639263463926366452007Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phosphoglycerate transport system sensor protein PgtB2e-130466
NC_003198:2453074:2468435246843524704412007Salmonella enterica subsp. enterica serovar Typhi str. CT18,phosphoglycerate transport system sensor protein PgtB2e-130466
NC_004631:531254:5342715342715362772007Salmonella enterica subsp. enterica serovar Typhi Ty2, completephosphoglycerate transport system sensor protein PgtB2e-130466
NC_016832:531208:5342255342255362312007Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phosphoglycerate transport system sensor protein pgtB2e-130466
NC_016831:531404:5344215344215364272007Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphosphoglycerate transport system sensor protein PgtB8e-129461
NC_016845:2655512:2675731267573126777251995Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phosphoglycerate transporter1e-118427
NC_009648:1882500:1901753190175319037622010Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomephosphoglycerate transporter1e-118427
NC_011742:3245500:3246898324689832489072010Escherichia coli S88 chromosome, complete genomePhosphoglycerate transport system sensor protein2e-112406
NC_008563:3332114:3332114333211433341232010Escherichia coli APEC O1, complete genomeputative regulatory protein2e-112406
NC_004431:4955658:4956962495696249589712010Escherichia coli CFT073, complete genomeRegulatory protein2e-112406
NC_008253:3122148:3142131314213131441402010Escherichia coli 536, complete genomeregulatory protein6e-112405