Pre_GI: BLASTP Hits

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Query: NC_006511:3079512:3095946 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 3095946, End: 3096212, Length: 267

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:3093465:315159631515963151787192Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-0961.6
NC_011149:3187022:320340432034043203778375Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein8e-47185
NC_011147:3075186:309162030916203091994375Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-47185
NC_003198:3126548:314297131429713143237267Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein8e-46182
NC_016832:3100683:311710631171063117372267Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-46182
NC_004631:3112043:312846631284663128732267Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-46182