Pre_GI: BLASTN Hits

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Query: NC_006361:792904 Nocardia farcinica IFM 10152, complete genome

Start: 792904, End: 812812, Length: 19909

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011206:469901*46990148812718227Acidithiobacillus ferrooxidans ATCC 53993, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013093:7722436*7722436776426141826Actinosynnema mirum DSM 43827, complete genome4e-168599BLASTN svgBLASTP svg
NC_013385:1504650*1504650152847923830Ammonifex degensii KC4, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011891:2264853*2264853228864223790Anaeromyxobacter dehalogenans 2CP-1, complete genome7e-25123BLASTN svgBLASTP svg
NC_007760:2175992*2175992219609920108Anaeromyxobacter dehalogenans 2CP-C, complete genome3e-27131BLASTN svgBLASTP svg
NC_011145:2190531*2190531221308322553Anaeromyxobacter sp. K, complete genome7e-25123BLASTN svgBLASTP svg
NC_015145:2994418*2994418301475220335Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome4e-88333BLASTN svgBLASTP svg
NC_021150:603447*60344762358120135Azotobacter vinelandii CA6, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012560:603447*60344762358120135Azotobacter vinelandii DJ, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_013172:2647716*2647716267284725132Brachybacterium faecium DSM 4810, complete genome2e-157563BLASTN svgBLASTP svg
NC_013194:3984377*3984377400260218226Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete6e-1073.8BLASTN svgBLASTP svg
NC_015380:1066911*1066911109186024950Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015514:1088767*1088767111461425848Cellulomonas fimi ATCC 484 chromosome, complete genome2e-179636BLASTN svgBLASTP svg
NC_014151:2945037*2945037297209927063Cellulomonas flavigena DSM 20109 chromosome, complete genome0666BLASTN svgBLASTP svg
NC_005085:659378*65937868456625189Chromobacterium violaceum ATCC 12472, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_005085:4499500*4499500451890519406Chromobacterium violaceum ATCC 12472, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009480:2932108*2932108295389521788Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete7e-130472BLASTN svgBLASTP svg
NC_010407:316320*31632033498318664Clavibacter michiganensis subsp. sepedonicus chromosome, complete6e-124452BLASTN svgBLASTP svg
NC_014958:3094500*3094500311934324844Deinococcus maricopensis DSM 21211 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010002:15845001584500161170527206Delftia acidovorans SPH-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008751:2060391*2060391207813917749Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002937:1374532*1374532139596721436Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete1e-1179.8BLASTN svgBLASTP svg
NC_013508:3387272*3387272341154824277Edwardsiella tarda EIB202, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014666:7641060*7641060766551924460Frankia sp. EuI1c chromosome, complete genome1e-140507BLASTN svgBLASTP svg
NC_013721:276717*27671730391327197Gardnerella vaginalis 409-05, complete genome2e-22115BLASTN svgBLASTP svg
NC_012489:4336790*4336790438246945680Gemmatimonas aurantiaca T-27, complete genome9e-0660BLASTN svgBLASTP svg
NC_013757:4707960*4707960474173433775Geodermatophilus obscurus DSM 43160, complete genome2e-155557BLASTN svgBLASTP svg
NC_015588:701606*70160672031718712Isoptericola variabilis 225 chromosome, complete genome0646BLASTN svgBLASTP svg
NC_009664:1569335*1569335161469045356Kineococcus radiotolerans SRS30216, complete genome5e-143515BLASTN svgBLASTP svg
NC_010617:665830*66583069497729148Kocuria rhizophila DC2201, complete genome2e-124454BLASTN svgBLASTP svg
NC_013169:2147111*2147111217279325683Kytococcus sedentarius DSM 20547, complete genome6e-149535BLASTN svgBLASTP svg
NC_014507:45712245712247633419213Methanoplanus petrolearius DSM 11571 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012803:1839809*1839809185813118323Micrococcus luteus NCTC 2665, complete genome8e-145521BLASTN svgBLASTP svg
NC_014391:6175531*6175531619392618396Micromonospora aurantiaca ATCC 27029 chromosome, complete genome0741BLASTN svgBLASTP svg
NC_014815:622048*62204864270320656Micromonospora sp. L5 chromosome, complete genome0741BLASTN svgBLASTP svg
NC_014246:373247*37324739851625270Mobiluncus curtisii ATCC 43063 chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_011896:2240990*2240990227968138692Mycobacterium leprae Br4923, complete genome2e-68268BLASTN svgBLASTP svg
NC_002677:2241065*2241065227975638692Mycobacterium leprae TN, complete genome2e-68268BLASTN svgBLASTP svg
NC_015711:5761030*5761030577913818109Myxococcus fulvus HW-1 chromosome, complete genome1e-35159BLASTN svgBLASTP svg
NC_020126:2216926*2216926224048823563Myxococcus stipitatus DSM 14675, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014752:98117*9811712709928983Neisseria lactamica ST-640, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003112:149593*14959317620526613Neisseria meningitidis MC58, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014211:258659*25865928488226224Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmid2e-120440BLASTN svgBLASTP svg
NC_014363:1902868*1902868192872325856Olsenella uli DSM 7084 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_008609:708886*70888674019331308Pelobacter propionicus DSM 2379, complete genome9e-0660BLASTN svgBLASTP svg
NC_009454:316000*31600033359917600Pelotomaculum thermopropionicum SI, complete genome3e-18101BLASTN svgBLASTP svg
NC_002516:4747154*4747154479172444571Pseudomonas aeruginosa PAO1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015556:717993*71799374011322121Pseudomonas fulva 12-X chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009439:4267356*4267356429048723132Pseudomonas mendocina ymp, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015312:5783366*5783366580217318808Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4e-128466BLASTN svgBLASTP svg
NC_008148:2156873*2156873217729320421Rubrobacter xylanophilus DSM 9941, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_013159:380014*38001440384023827Saccharomonospora viridis DSM 43017, complete genome1e-152547BLASTN svgBLASTP svg
NC_019673:8734993*8734993875416019168Saccharothrix espanaensis DSM 44229 complete genome3e-163583BLASTN svgBLASTP svg
NC_007677:1312243*1312243133416021918Salinibacter ruber DSM 13855, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013521:3285423*3285423331709931677Sanguibacter keddieii DSM 10542, complete genome5e-137496BLASTN svgBLASTP svg
NC_003155:5987000*5987000601614029141Streptomyces avermitilis MA-4680, complete genome7e-127462BLASTN svgBLASTP svg
NC_003888:5114147*5114147515215738011Streptomyces coelicolor A3(2), complete genome6e-112412BLASTN svgBLASTP svg
NC_021177:4945878*4945878496359917722Streptomyces fulvissimus DSM 40593, complete genome2e-136494BLASTN svgBLASTP svg
NC_010572:3314500*3314500334441929920Streptomyces griseus subsp. griseus NBRC 13350, complete genome7e-133482BLASTN svgBLASTP svg
NC_015953:4385419*4385419443376948351Streptomyces sp. SirexAA-E chromosome, complete genome3e-138500BLASTN svgBLASTP svg
NC_015953:32270003227000325159924600Streptomyces sp. SirexAA-E chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_018750:4728870*4728870475950630637Streptomyces venezuelae ATCC 10712, complete genome6e-124452BLASTN svgBLASTP svg
NC_015957:690817*69081771136520549Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-171609BLASTN svgBLASTP svg
NC_013595:1100230*1100230112822127992Streptosporangium roseum DSM 43021, complete genome2e-133484BLASTN svgBLASTP svg
NC_014152:305955*30595532559919645Thermincola sp. JR, complete genome9e-0660BLASTN svgBLASTP svg
NC_019897:2908971*2908971294117632206Thermobacillus composti KWC4 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014165:597000*59700065256355564Thermobispora bispora DSM 43833 chromosome, complete genome1e-119438BLASTN svgBLASTP svg
NC_014377:112992*11299214783634845Thermosediminibacter oceani DSM 16646 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003902:2469500*2469500250580636307Xanthomonas campestris pv. campestris str. ATCC 33913, complete4e-0867.9BLASTN svgBLASTP svg