Pre_GI: BLASTN Hits

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Query: NC_006361:498305 Nocardia farcinica IFM 10152, complete genome

Start: 498305, End: 517099, Length: 18795

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:42478114247811427081623006Actinosynnema mirum DSM 43827, complete genome4e-20107BLASTN svgBLASTP svg
NC_013093:1411882*1411882143830226421Actinosynnema mirum DSM 43827, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013131:7889127*7889127791526926143Catenulispora acidiphila DSM 44928, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015856:63335363335365700023648Collimonas fungivorans Ter331 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_001263:2461941*2461941248301921079Deinococcus radiodurans R1 chromosome 1, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_012779:21275422127542216530837767Edwardsiella ictaluri 93-146, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_009921:3384116*3384116340895324838Frankia sp. EAN1pec, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_015656:381554*38155440733625783Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011146:40700004070000409209922100Geobacter bemidjiensis Bem, complete genome9e-0660BLASTN svgBLASTP svg
NC_018581:49929524992952501689423943Gordonia sp. KTR9 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_020133:57106615710661573224421584Mycobacterium liflandii 128FXT, complete genome2e-40174BLASTN svgBLASTP svg
NC_010612:61131556113155613265419500Mycobacterium marinum M, complete genome9e-43182BLASTN svgBLASTP svg
NC_008705:49754024975402499824322842Mycobacterium sp. KMS, complete genome9e-0660BLASTN svgBLASTP svg
NC_018681:867230*86723090173034501Nocardia brasiliensis ATCC 700358 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_006361:36153223615322363714921828Nocardia farcinica IFM 10152, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008699:29167522916752293906622315Nocardioides sp. JS614, complete genome4e-26127BLASTN svgBLASTP svg
NC_011144:26742422674242270317628935Phenylobacterium zucineum HLK1, complete genome9e-0660BLASTN svgBLASTP svg
NC_014168:2575799*2575799261011334315Segniliparus rotundus DSM 44985 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015593:15810715810720009941993Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete1e-0765.9BLASTN svgBLASTP svg
NC_021177:21398382139838216484225005Streptomyces fulvissimus DSM 40593, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_013595:4031947*4031947406329831352Streptosporangium roseum DSM 43021, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014931:55739425573942559409920158Variovorax paradoxus EPS chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_012792:54796754796758771739751Variovorax paradoxus S110 chromosome 2, complete genome6e-0763.9BLASTN svgBLASTP svg